Pairwise Alignments

Query, 467 a.a., TolC family outer membrane protein from Dickeya dianthicola ME23

Subject, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056

 Score =  155 bits (393), Expect = 2e-42
 Identities = 122/453 (26%), Positives = 208/453 (45%), Gaps = 23/453 (5%)

Query: 3   RKAVLLMVVGVLEVLSLSGGSAQAVGLLDAWELALRNDAQLQAAGFERDAGQEEVAIGRA 62
           +K + L V   L  LS    +  A  L + +  A  ND QL +   +RDA  E V   R+
Sbjct: 2   KKLLPLFVSAALGTLS---SAVWAENLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSRS 58

Query: 63  GLLPSLQYNYGVNYSHSKVTQQDRALNNTTKRDYDNYVSTLTLRQPLLDYAAWARYQQGI 122
            LLP +    G N + S          +   R+ D   + +   Q L   ++W       
Sbjct: 59  ALLPQINLTAGYNINRS----------DQAPRESDLLSAGINFSQELYQRSSWVSLDTAE 108

Query: 123 TRKLMADQRFRDRSQDLMVRLYQAWSEALLAQEKLLLLDAQRRAYQEQLALNRRLLAAGE 182
            +   AD ++    Q L++R+ +A+ E L AQ+ L  + A++ A   QL   ++    G 
Sbjct: 109 KKARQADSQYAATQQGLILRVAKAYFEVLRAQDNLEFVRAEKAAVGRQLEQTKQRFEVGL 168

Query: 183 GTQTDLRETEARYTVTEAQRIEQEDTLDAAMTDLENMMGLPLQIQDLSPLA-LDTLPDNV 241
              TD+ + +A++    A  +  E++L  +   L  + G     Q+ S LA LDT     
Sbjct: 169 SAITDVHDAQAQFDGVLADEVLAENSLTNSYEALREITG-----QEYSKLAVLDTKRFAA 223

Query: 242 TENRSLSQWR-ELAVRHNAKLAVQRENVDYSRYEIERNRAGHLPTLDLVASTR---NSLS 297
           +     S+   E A + N  L   R + D +R  I    +GHLP+L L        NS  
Sbjct: 224 SRTTESSEALIEKAQQQNLSLLAARISQDVARDNISLASSGHLPSLTLDGGYNYGNNSND 283

Query: 298 ESEYNYNQKYDTQTVGLQVRVPLYSGGAVSASMRQATAEYQQSQAELDNQTRQTFAELRR 357
            ++    ++Y+   +G+ ++VPLY+GG  ++  +QA   Y  +  +L+   R    ++R 
Sbjct: 284 NAKNTSGEEYNDFKIGVNLKVPLYTGGNTTSLTKQAEFAYVAASQDLEAAYRSVVKDVRA 343

Query: 358 QFNLCANGAAKIRAWQMSVTAAEEAIRATRQSVAGGERINLDVLMAEQEWYNARRELTEV 417
             N        +RA++ +V +A+ A+ AT      G R  +DVL A +  Y+A + L+  
Sbjct: 344 YNNNINASIGALRAYEQAVISAKSALEATEAGFDVGTRTIVDVLDATRRLYDANKNLSNA 403

Query: 418 KYRWLQAWLNLRYTGGTLNEQDMMQLAAWFQSA 450
           +Y ++ + L LR   GTL+EQD+M + A  + A
Sbjct: 404 RYDYILSVLQLRQAIGTLSEQDVMDVNAGLKVA 436