Pairwise Alignments

Query, 268 a.a., exodeoxyribonuclease III from Dickeya dianthicola ME23

Subject, 264 a.a., exodeoxyribonuclease III protein from Sinorhizobium meliloti 1021

 Score =  147 bits (370), Expect = 3e-40
 Identities = 93/269 (34%), Positives = 137/269 (50%), Gaps = 15/269 (5%)

Query: 1   MKFVSFNINGLRARPNQLAAIIEQHQPDVIGLQETKVHDDMFPLEEVKQFGYHVFYHGQK 60
           MK  ++N+NG+  R   L   +E+  PDV+ LQE K  D  FP++ ++  GY   +HGQK
Sbjct: 1   MKIATYNVNGVNGRLGVLLRWLEEASPDVVCLQELKAPDPKFPVKAIEAAGYGAIWHGQK 60

Query: 61  GHYGVALLTK-AEPLAVRRGFPTDEEDAQRRIIMADL-ATPLGTLTVVNGYFPQGESRDH 118
              GVA+L +  EP   R+G P D +D   R I A +    +G L     Y P G     
Sbjct: 61  SWNGVAILARDREPTLTRKGLPGDPDDTHSRYIEAAVEGMVIGCL-----YLPNGNPYPG 115

Query: 119 PVKFPAKTRFYQDLQHYLDQHHQADQPVLIMGDMNISPTDLDIGIGEDNRKRWLRTGKCS 178
           P KF  K  ++  L  Y  +  + D PV++ GD N+ PT+LD+   E    RW+      
Sbjct: 116 P-KFEYKLAWFHRLTAYAAELLELDVPVILAGDYNVMPTELDVYKPE----RWV--NDAL 168

Query: 179 FLPEEREWMERLKNWGLVDTFRAANPECQDRFSWFDYRSAGFDDNRGLRIDLIMATAPLA 238
           F  E R+   RL   G  D  R  +P  +  ++++DY    F  + GLRID ++ +  + 
Sbjct: 169 FRIEVRDAYHRLLEQGWTDALRQLHPG-ERVYTFWDYFRNAFARDAGLRIDHLLLSPHVT 227

Query: 239 SRCAATGIDYAIRGMEKPSDHAPVWAEFT 267
            R +A G+D  +RG E  SDHAP W E +
Sbjct: 228 LRLSAAGVDRHVRGWEHTSDHAPAWIELS 256