Pairwise Alignments

Query, 470 a.a., murein DD-endopeptidase MepM from Dickeya dianthicola ME23

Subject, 646 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  120 bits (300), Expect = 2e-31
 Identities = 83/233 (35%), Positives = 122/233 (52%), Gaps = 12/233 (5%)

Query: 229 SAQAAGLTSSEVREVIRALQWQLDFR-KLRKDDSFAVLISREILDGRS-EQSELQGVRLR 286
           +A + G+ +  +  V++ L   +DF+ +L+  DS     S     GR+ E SEL  V  +
Sbjct: 390 AALSYGMNADMIALVVKLLASNVDFQAQLKPTDSLEAFFSVTDESGRATEDSELLYVNAK 449

Query: 287 TGGKN--YYAFRAEDGK---FYDREASGLTRGFLRFPTMKQFKISSNFNPRRLNPVTGRI 341
            G     +Y F+  D     ++D++   + +  LR P +      S F  RR +P+ G  
Sbjct: 450 FGDAETRFYRFQDPDDNSIDYFDKDGKSIRQFLLRNP-VPNGHFRSGFGMRR-HPILGFS 507

Query: 342 APHRGVDFSMPVGTPVLAVGDGEVVVAERDSEA-GNFVAVRHGRQYTTRYMHMNRLL--V 398
             H GVD+S P GTP++A G+G V  A  DS   GN   +RH   Y + Y H + +   V
Sbjct: 508 RMHTGVDWSAPRGTPIIAAGNGVVQKAGWDSGGYGNQTLIRHANGYVSSYNHQSAIAKSV 567

Query: 399 KPGQRIKRGDRIGLSGNTGRSTGPHLHYELWVNQQAVNPLTAKLPRSEGLIGK 451
           KPG ++ +G  IG  G TG STGPHLHYEL VN   V+PL  +LP  + L G+
Sbjct: 568 KPGTKVVQGQVIGWVGTTGLSTGPHLHYELIVNGNKVDPLRIRLPGGKSLGGE 620