Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Dickeya dianthicola ME23

Subject, 350 a.a., Holliday junction DNA helicase RuvB (NCBI) from Rhodospirillum rubrum S1H

 Score =  415 bits (1067), Expect = e-121
 Identities = 207/329 (62%), Positives = 262/329 (79%), Gaps = 2/329 (0%)

Query: 3   EADRLISPGAVADEELQDRAIRPKLLSEYVGQPVVREQMEIFIEAARRRGDALDHLLIFG 62
           E +RLIS G   + E+ D A+RP+ L+++VGQ   RE + +F++AAR RG+A+DH+L  G
Sbjct: 7   EDERLIS-GRRREGEV-DAALRPQSLADFVGQRQTRENLGVFVQAARARGEAMDHVLFHG 64

Query: 63  PPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAALLTNLEPHDVLFIDEIHRLSPVV 122
           PPGLGKTTLA IVA E+GV  R TSGP++ KAGDLAA+LTNLEP DVLFIDEIHRL+P +
Sbjct: 65  PPGLGKTTLAQIVARELGVGFRGTSGPMIVKAGDLAAILTNLEPRDVLFIDEIHRLNPAI 124

Query: 123 EEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLE 182
           EEVLYPAMED+QLD++IGEGPAARS+++DLPPFTL+GATTR+G LT+PLRDRFGI  RL+
Sbjct: 125 EEVLYPAMEDFQLDLIIGEGPAARSVRIDLPPFTLVGATTRSGLLTTPLRDRFGIPLRLD 184

Query: 183 FYQVADLQHIVRRSAQCLGLDMTDDGALEVARRSRGTPRIANRLLRRVRDFSEVKSDGAI 242
           FY+  +L  IV R ++ LG+ +TD+GA EVARRSRGTPR+A RLLRRVRDF+ V     +
Sbjct: 185 FYETDELVQIVTRGSRLLGMALTDEGAREVARRSRGTPRVAGRLLRRVRDFAAVAGRSPV 244

Query: 243 SAVVAVQALDMLAVDSEGFDYMDRKLLLAVIDKFMGGPVGLDNLAAAIGEERETIEDVLE 302
            A +A  AL+ L VD  G D MDR+ L  + D + GGPVG+D LAAA+ EER+T+EDV+E
Sbjct: 245 DAFIADAALNRLEVDGRGLDAMDRRYLSRMADHYGGGPVGVDTLAAALAEERDTVEDVIE 304

Query: 303 PYLIQQGFLQRTPRGRIATQHAYRHFGLT 331
           PYLIQQGF++RTPRGR+ T  A+ H GLT
Sbjct: 305 PYLIQQGFIKRTPRGRMLTAIAWTHLGLT 333