Pairwise Alignments

Query, 578 a.a., cysteine/glutathione ABC transporter ATP-binding protein/permease CydC from Dickeya dianthicola ME23

Subject, 600 a.a., lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA (RefSeq) from Shewanella sp. ANA-3

 Score =  179 bits (453), Expect = 4e-49
 Identities = 152/553 (27%), Positives = 266/553 (48%), Gaps = 30/553 (5%)

Query: 42  FLAASAVAGLVGLTTF------NYMLPAAGVRGAAILRTASRYFERLVSHDG----TFRV 91
           F +A A++  + L T       N +L  A +    IL  + R F   VS  G    + R+
Sbjct: 56  FSSAPAISNGIALPTSQGFHADNQVLLMAPI--VVILMFSLRGFANFVSTYGISYMSARL 113

Query: 92  LLHLRVFTFSRILPLAPGGLSGFRQADLLNRLVADVDTLDHLY-LRVISPLVSALAVI-- 148
           ++ +R   F   L L    +      +L++++  D + +       +IS +   + VI  
Sbjct: 114 IMDMRQQVFEHYLSLPVSYMDKENTGNLISKVTFDTEQIARASGSALISIVRDGVTVIGM 173

Query: 149 LALAYGLSWLDASLALTLAAIMLALLLLLPLTFYRAGQPVGADLTTLRAHYRVQLTTWIQ 208
           LAL +  SW  +   L +  IM  ++ ++   F +    V   + T            I+
Sbjct: 174 LALMFYNSWKLSLCILVIGPIMGLVITIVSRRFRK----VSKQIQTAMGDVSAATEQMIK 229

Query: 209 GQAELAVFGALAHFRQQLEILEQRWFKRQRQQAELGALSQSILIAAGGLTATLLLWLAA- 267
           G   +  FG       +   +  R   +  + A   A+SQ +++  G      +L+ A+ 
Sbjct: 230 GHKNVLAFGGQETETARFAKVNDRNRHQNMKLAVAQAISQPLIMVIGSFALAFVLYAASL 289

Query: 268 GGVGGDQQPGALIALF--VFTSLAAFEALAPVAGAFQHIGQVVASAARVDQLLKLRPPVT 325
             +  D   G    +   +   L   + L  V   FQ   + +A+   V +LL   P   
Sbjct: 290 DSMKADLTAGTFATILGAMMAMLQPIKNLTRVNAEFQ---RGIAACTTVFELLDTLPESD 346

Query: 326 FASQGPARLEQVQLTLDKVSFTYPEQNQPALSEISLTLAPGEHIALLGRTGCGKSTLLQL 385
             +    R +   L  D VSF+Y  Q + AL  I   +  G+ +AL+GR+G GKST+  L
Sbjct: 347 TGTYTVKRAKG-NLRFDNVSFSYDGQERRALDNIDFEVTQGQTLALVGRSGSGKSTIASL 405

Query: 386 LTRAWD-CSAGEIRLNDTPIAAYTEPTLRDAMSVVPQRAHIFSATLRENLRLAAP--AAS 442
           +TR +    +G+I L+D  I  Y+  +LR+ +++V Q+  +F+ T+  N+  A P  A  
Sbjct: 406 VTRFYTGLESGDILLDDVSIYDYSLKSLRNQVALVSQQVTLFNDTIANNIAYAYPGEATR 465

Query: 443 DERLQTVLAQVGLEKLLE-DQGLNAWLGEGGRQLSGGEQRRIGVARALLHPAPLVLLDEP 501
           ++ +Q       +E + +  +GL+  +GE G  LSGG+++RI +ARA+L  AP+++LDE 
Sbjct: 466 EQIIQAATLAHAMEFIEQLPEGLDTQVGENGVLLSGGQRQRIAIARAMLRDAPVLILDEA 525

Query: 502 TEGLDADTEQRILQLLRQHCLGKSLIVITHRLNGLESMDRLCVMDGGQLVEQGSHHSLMA 561
           T  LD ++E+ I Q L      ++ +VI HRL+ +ES D++ V+D G++VE+G+H SL+ 
Sbjct: 526 TSALDTESEKAIQQGLDNLRQNRTSVVIAHRLSTIESADQILVVDQGRIVERGTHKSLLE 585

Query: 562 LQGRYWQFHQHLF 574
           L G Y + +Q  F
Sbjct: 586 LGGMYAKLYQMQF 598