Pairwise Alignments

Query, 331 a.a., ABC transporter permease from Dickeya dianthicola ME23

Subject, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  166 bits (419), Expect = 1e-45
 Identities = 104/302 (34%), Positives = 162/302 (53%), Gaps = 15/302 (4%)

Query: 27  LITVVALIALFGLASDNFLDPNNIINILRSIAIVTVIAVAVSLSLSVGGFDLSVGSTASL 86
           LI ++ L+ +    + NF   +N++NILR  ++  +IAV ++L +   G DLSVGS  +L
Sbjct: 35  LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAGIDLSVGSVLAL 94

Query: 87  ANALVISLFVWHGFGTTAAIALTLTLCLLVGLFNAFLIVVLRIPDMLATLASLFVIQGVA 146
             A   +L          A+   L     +G  +  +I   ++   +ATL ++ +++GV 
Sbjct: 95  CGAFAATLVAME-VPVLVAVPTALLAGAALGAISGIIIAKGKVQAFIATLVTMTLLRGVT 153

Query: 147 MTYSYGGSITQNMLLPSGDMAEGVIPEVFATLGQ-----VPVIVVIMLVVTVLAQLYMSL 201
           M Y+ G  I+        D A+      FA  G      +PV V +M+VV   A   ++ 
Sbjct: 154 MVYTDGRPISTGFT----DTAD-----TFAWFGTGYTLGIPVPVWLMVVVFAGAWYLLNH 204

Query: 202 TKHGRRMYAIGGNPEAARLAGIRTARYRVLAYLFSSLLAALGGILLASRIGSSQVNAGGG 261
           T+ GR +YA+GGN  A RL+GI   R ++  Y    LLAAL GI++ SR+ S+Q  AG G
Sbjct: 205 TRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSSAQPTAGMG 264

Query: 262 YLMDAVAAAYIGFSLAGSGKPNALGTLVGAVILGVLQNGLVMLSVPYYAMDIIKGLVLAL 321
           Y +DA+AA  +G +    GK   +GTL+GA+I+G L N L +L V  Y   I K +V+ L
Sbjct: 265 YELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVVILL 324

Query: 322 AL 323
           A+
Sbjct: 325 AV 326