Pairwise Alignments

Query, 530 a.a., microcin C ABC transporter ATP-binding protein YejF from Dickeya dianthicola ME23

Subject, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  394 bits (1011), Expect = e-114
 Identities = 219/528 (41%), Positives = 318/528 (60%), Gaps = 10/528 (1%)

Query: 1   MSAHPLLEIRDLSIAFRNGGQQRQVVDQVSLSIEAGETLALVGESGSGKSVTALSVLRLL 60
           M+   LL +  LS+     GQQ  VV  VS  +  GE   +VGESGSGK++   +++ LL
Sbjct: 1   MTMDKLLTVCGLSLEVARTGQQ--VVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLL 58

Query: 61  PSPPVVYLHGDILFAGESLLNASEQRLRQVRGDRIAMIFQEPMVSLNPLHTIEKQLAEVL 120
           P P +    G + + G  +L   E  LR +RG  I ++FQEPM SLNP  TI +QL E L
Sbjct: 59  P-PTIKVADGSVSYKGRDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGL 117

Query: 121 SLHRGMRRDAARGEIVGCLERVGIRQAARRLADFPHQLSGGERQRVMIAMALLTQPDLLI 180
            LH        R  I+  L+RVGIR     L+ +PH+ SGG RQR+M+A  +L +P LLI
Sbjct: 118 ILHTKASAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLI 177

Query: 181 ADEPTTALDVTVQAQILDLLNELKQELNMGLLFITHNLNIVRRLADRVAVMQAGRCVEQN 240
           ADEPTTALD  +Q  +++L+ EL +     +L I+H+L +V R   R+ VM+ G  VE+ 
Sbjct: 178 ADEPTTALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKG 237

Query: 241 RTRELFSAPQHPYTRQLLNAEP-TGEAPPLEPTASTLLDVRELGVSFPIRRGLLRRTVGE 299
           RT +L  APQHPYT++LL++ P  G    ++ T+  ++  R++ V +  R+ L R+    
Sbjct: 238 RTEDLLKAPQHPYTKKLLSSLPFRGRPRQIDLTSVPMISARDIIVDYAGRKSLFRKN-KP 296

Query: 300 KSVLQALSFSLRRGESIGLVGESGSGKSTTGLALLRLL-RSRGEIWFDGQPLHRFNHKQM 358
           K  L  +S  +  GE + LVG SGSGK+T G  +  L+  S G I F G+P      +  
Sbjct: 297 KRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGRP----RTENW 352

Query: 359 LPVRRRIQVVFQDPNGSLNPRLNVEQIIAEGLRVHHPLSPAEQTQRVIQSMQEVGLDPDS 418
              R   Q+VFQDP  SL+PR+ +E ++ E LR    L    + +R +++++EVGL  D 
Sbjct: 353 TDYRLNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEEVGLGVDY 412

Query: 419 RHRYPSEFSGGQRQRIAIARALILQPELLILDEPTSSLDRTVQAQILTLLKTLQQTHQLA 478
             RYP E SGGQRQR+AIARA+  +P  LI DEP S+LD TV+AQ+L L   LQ+ +  +
Sbjct: 413 AGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFS 472

Query: 479 YLFISHDLHVVRSLCHQVIVLRHGEVVEQGECRQLFEHPQQDYTRQLL 526
            LFISHDL VV  +  +V+V++ G ++E+G+   +F+ P++ YTR+LL
Sbjct: 473 CLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLL 520



 Score =  163 bits (413), Expect = 1e-44
 Identities = 102/269 (37%), Positives = 152/269 (56%), Gaps = 20/269 (7%)

Query: 1   MSAHPLLEIRDLSIAFRNG------GQQRQVVDQVSLSIEAGETLALVGESGSGKSVTAL 54
           +++ P++  RD+ + +          + ++ +  VS+ I  GE +ALVG SGSGK+    
Sbjct: 269 LTSVPMISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGR 328

Query: 55  SVLRLLPSPPVVYLHGDILFAGESLL-NASEQRLRQVRGDRIAMIFQEPMVSLNPLHTIE 113
           ++  L     V    G I F G     N ++ RL         M+FQ+P  SL+P  TIE
Sbjct: 329 TIAGL-----VTESEGRIQFQGRPRTENWTDYRLN------CQMVFQDPYSSLDPRMTIE 377

Query: 114 KQLAEVLSLHRGMRRDAARGEIVGCLERVGIRQAARRLADFPHQLSGGERQRVMIAMALL 173
             + E L    G+   A R   +  LE VG+         +PH+LSGG+RQRV IA A+ 
Sbjct: 378 ALVEEALRPVPGLDGKAKRKRTLETLEEVGL--GVDYAGRYPHELSGGQRQRVAIARAIA 435

Query: 174 TQPDLLIADEPTTALDVTVQAQILDLLNELKQELNMGLLFITHNLNIVRRLADRVAVMQA 233
            +P  LIADEP +ALDVTV+AQ+LDL ++L++      LFI+H+L +V ++ADRV VMQ 
Sbjct: 436 RRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQD 495

Query: 234 GRCVEQNRTRELFSAPQHPYTRQLLNAEP 262
           GR +E+     +F +P+  YTR+LL+A P
Sbjct: 496 GRIIEEGDRDTIFDSPKEAYTRRLLSAIP 524