Pairwise Alignments

Query, 530 a.a., microcin C ABC transporter ATP-binding protein YejF from Dickeya dianthicola ME23

Subject, 556 a.a., ABC transporter for D-Raffinose, ATPase component (from data) from Sinorhizobium meliloti 1021

 Score =  490 bits (1262), Expect = e-143
 Identities = 265/526 (50%), Positives = 364/526 (69%), Gaps = 3/526 (0%)

Query: 5   PLLEIRDLSIAFRNGGQQRQVVDQVSLSIEAGETLALVGESGSGKSVTALSVLRLLPSPP 64
           P+++ R ++++F+      Q V  VS  +  GET+A+VGESGSGKSVTA +V+ LL    
Sbjct: 24  PVIDARKVAVSFKVENGTVQAVKDVSFQLYRGETVAIVGESGSGKSVTARTVMGLLSKRA 83

Query: 65  VVYLHGDILFAGESLLNASEQRLRQVRGDRIAMIFQEPMVSLNPLHTIEKQLAEVLSLHR 124
            +     I + G  +L  S++  R +RGDRI+MIFQEPM SLNP++TI  Q+ E +  HR
Sbjct: 84  TIAPQARIEYDGRDVLKFSKRERRALRGDRISMIFQEPMSSLNPVYTIGSQIIEAIRAHR 143

Query: 125 GMRRDAARGEIVGCLERVGIRQAARRLADFPHQLSGGERQRVMIAMALLTQPDLLIADEP 184
            + R AA    +  L  V I     RL  +PHQLSGG+RQRVMIAMAL   PD+LIADEP
Sbjct: 144 RVSRRAAAERALELLRHVQIPDPEARLNQYPHQLSGGQRQRVMIAMALANDPDVLIADEP 203

Query: 185 TTALDVTVQAQILDLLNELKQELNMGLLFITHNLNIVRRLADRVAVMQAGRCVEQNRTRE 244
           TTALDVTVQAQIL+L+ +L+QEL M ++ ITH+L +VR+ +D V VMQ G   E N T  
Sbjct: 204 TTALDVTVQAQILNLIRKLQQELGMAVILITHDLTVVRQFSDYVYVMQLGEVKEHNTTEA 263

Query: 245 LFSAPQHPYTRQLLNAEPTGEAPPLEPTASTLLDVRELGVSFPIRR-GLLRRTVGEKSVL 303
           LF+ PQH YTR+LL++EP+G A PL   A  LLD R + VSF +++ G  R    E   +
Sbjct: 264 LFADPQHAYTRRLLSSEPSGSANPLPDDAPILLDGRNVRVSFTLKKGGFFRPEFKELVAV 323

Query: 304 QALSFSLRRGESIGLVGESGSGKSTTGLALLRLLRS-RGEIWFDGQPLHRFNHKQMLPVR 362
             LS +LRR E++GLVGESGSGK+T G AL+RLL +  GEI+F+G+P+H  + K M P+R
Sbjct: 324 DGLSLNLRRHETLGLVGESGSGKTTFGQALIRLLNTDGGEIYFEGEPIHDKDRKGMRPLR 383

Query: 363 RRIQVVFQDPNGSLNPRLNVEQIIAEGLRVH-HPLSPAEQTQRVIQSMQEVGLDPDSRHR 421
            +IQ+VFQDP  SLNPR++V QII EGL V+    +  ++ +RV  ++   G+  +   R
Sbjct: 384 SKIQIVFQDPFSSLNPRMSVGQIIEEGLIVNGMGENRKDRLKRVEDALVSAGMPSNILSR 443

Query: 422 YPSEFSGGQRQRIAIARALILQPELLILDEPTSSLDRTVQAQILTLLKTLQQTHQLAYLF 481
           +P EFSGGQRQRIAIARA+ L+PE ++LDEPTS+LD +VQAQI+ LL+ LQ    L+YL 
Sbjct: 444 FPHEFSGGQRQRIAIARAVALEPEFILLDEPTSALDLSVQAQIIELLRRLQDERGLSYLV 503

Query: 482 ISHDLHVVRSLCHQVIVLRHGEVVEQGECRQLFEHPQQDYTRQLLQ 527
           ISHDL VVR+LCH+V+V++ G++VE+G   ++  +P+  YT +L++
Sbjct: 504 ISHDLKVVRALCHRVVVMQDGKIVEEGPVSEVLNNPKTAYTERLVK 549



 Score =  158 bits (400), Expect = 4e-43
 Identities = 97/264 (36%), Positives = 158/264 (59%), Gaps = 17/264 (6%)

Query: 6   LLEIRDLSIAF--RNGG------QQRQVVDQVSLSIEAGETLALVGESGSGKSVTALSVL 57
           LL+ R++ ++F  + GG      ++   VD +SL++   ETL LVGESGSGK+    +++
Sbjct: 295 LLDGRNVRVSFTLKKGGFFRPEFKELVAVDGLSLNLRRHETLGLVGESGSGKTTFGQALI 354

Query: 58  RLLPSPPVVYLHGDILFAGESLLNASEQRLRQVRGDRIAMIFQEPMVSLNPLHTIEKQLA 117
           RLL +       G+I F GE + +   + +R +R  +I ++FQ+P  SLNP  ++ + + 
Sbjct: 355 RLLNTDG-----GEIYFEGEPIHDKDRKGMRPLRS-KIQIVFQDPFSSLNPRMSVGQIIE 408

Query: 118 EVLSLH-RGMRRDAARGEIVGCLERVGIRQAARRLADFPHQLSGGERQRVMIAMALLTQP 176
           E L ++  G  R      +   L   G+   +  L+ FPH+ SGG+RQR+ IA A+  +P
Sbjct: 409 EGLIVNGMGENRKDRLKRVEDALVSAGM--PSNILSRFPHEFSGGQRQRIAIARAVALEP 466

Query: 177 DLLIADEPTTALDVTVQAQILDLLNELKQELNMGLLFITHNLNIVRRLADRVAVMQAGRC 236
           + ++ DEPT+ALD++VQAQI++LL  L+ E  +  L I+H+L +VR L  RV VMQ G+ 
Sbjct: 467 EFILLDEPTSALDLSVQAQIIELLRRLQDERGLSYLVISHDLKVVRALCHRVVVMQDGKI 526

Query: 237 VEQNRTRELFSAPQHPYTRQLLNA 260
           VE+    E+ + P+  YT +L+ A
Sbjct: 527 VEEGPVSEVLNNPKTAYTERLVKA 550