Pairwise Alignments

Query, 530 a.a., microcin C ABC transporter ATP-binding protein YejF from Dickeya dianthicola ME23

Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  439 bits (1128), Expect = e-127
 Identities = 238/532 (44%), Positives = 341/532 (64%), Gaps = 7/532 (1%)

Query: 1   MSAHPLLEIRDLSIAFRNGGQQRQVVDQVSLSIEAGETLALVGESGSGKSVTALSVLRLL 60
           M+   LLE++DL++ F + G   +    VS  ++AGETL ++GESGSGKSV+A +++ L+
Sbjct: 1   MTGPHLLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLI 60

Query: 61  PSPPVVYLHGDILFAGESLLNASEQRLRQVRGDRIAMIFQEPMVSLNPLHTIEKQLAEVL 120
            +PP     G + + G  L + SE   R + G RIAMIFQ+P+  LNP++TI  QL EV 
Sbjct: 61  DTPPGDICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVF 120

Query: 121 SLHRGMRRDAARGEIVGCLERVGIRQAARRLADFPHQLSGGERQRVMIAMALLTQPDLLI 180
           ++H       AR   +  L RVGI +  +R+  +PHQ SGG+RQR+MI MA+  +P++LI
Sbjct: 121 TVHGVASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILI 180

Query: 181 ADEPTTALDVTVQAQILDLLNELKQELNMGLLFITHNLNIVRRLADRVAVMQAGRCVEQN 240
           ADEPTTALDV+VQAQIL+LL +L+ E  + ++ ITH+L +   +ADRV VM++GR VE+ 
Sbjct: 181 ADEPTTALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEG 240

Query: 241 RTRELFSAPQHPYTRQLLNAEPTGE--AP--PLEPTASTLLDVRELGVSFPIRRGLLRRT 296
             R +F  P H YTR L+NA P  +  AP  P  P    +L+V+ +   + +  G   + 
Sbjct: 241 EARAVFENPAHSYTRTLINALPHADDRAPPRPARPAGKPILEVKNIDKFYTLSSGFFAKP 300

Query: 297 VGEKSVLQALSFSLRRGESIGLVGESGSGKSTTGLALLRLLR-SRGEIWFDGQPLHRFNH 355
               +V + LSF +  GE+IG+VGESGSGKST    LL L   S GE  F G+ + + + 
Sbjct: 301 ARLHAV-KNLSFDVAAGETIGIVGESGSGKSTVARVLLGLNEASGGEALFHGRDVLKMDR 359

Query: 356 KQMLPVRRRIQVVFQDPNGSLNPRLNVEQIIAEGLRVHHP-LSPAEQTQRVIQSMQEVGL 414
           KQ+L  RR++Q+VFQDP  S+NPR+ V  I++E  R+H   L       RV + +  VGL
Sbjct: 360 KQLLAFRRKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKDILEKTRWRDRVTELLGLVGL 419

Query: 415 DPDSRHRYPSEFSGGQRQRIAIARALILQPELLILDEPTSSLDRTVQAQILTLLKTLQQT 474
           +P+   RYP +FSGGQRQRIAIARAL   PEL++ DE  S+LD +VQ Q++ LL  L+  
Sbjct: 420 NPEHAKRYPHQFSGGQRQRIAIARALACDPELVVCDEAVSALDVSVQVQVIDLLAELRDR 479

Query: 475 HQLAYLFISHDLHVVRSLCHQVIVLRHGEVVEQGECRQLFEHPQQDYTRQLL 526
             LAY+FI+HDL +VR    ++IV++ GE+VE     ++F +PQ  YTRQL+
Sbjct: 480 LGLAYIFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIFRNPQHAYTRQLI 531



 Score =  181 bits (458), Expect = 8e-50
 Identities = 107/266 (40%), Positives = 157/266 (59%), Gaps = 17/266 (6%)

Query: 5   PLLEIRD------LSIAFRNGGQQRQVVDQVSLSIEAGETLALVGESGSGKSVTALSVLR 58
           P+LE+++      LS  F     +   V  +S  + AGET+ +VGESGSGKS  A  +L 
Sbjct: 279 PILEVKNIDKFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLG 338

Query: 59  LLPSPPVVYLHGDILFAGESLLNASEQRLRQVRGDRIAMIFQEPMVSLNPLHTIEKQLAE 118
           L  +       G+ LF G  +L    ++L   R  ++ M+FQ+P  S+NP  T+   ++E
Sbjct: 339 LNEASG-----GEALFHGRDVLKMDRKQLLAFRR-KVQMVFQDPYSSMNPRMTVFDIVSE 392

Query: 119 VLSLHRG-MRRDAARGEIVGCLERVGIR-QAARRLADFPHQLSGGERQRVMIAMALLTQP 176
              +H+  + +   R  +   L  VG+  + A+R   +PHQ SGG+RQR+ IA AL   P
Sbjct: 393 PWRIHKDILEKTRWRDRVTELLGLVGLNPEHAKR---YPHQFSGGQRQRIAIARALACDP 449

Query: 177 DLLIADEPTTALDVTVQAQILDLLNELKQELNMGLLFITHNLNIVRRLADRVAVMQAGRC 236
           +L++ DE  +ALDV+VQ Q++DLL EL+  L +  +FITH+L IVR  ADR+ VM++G  
Sbjct: 450 ELVVCDEAVSALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRIIVMKSGEI 509

Query: 237 VEQNRTRELFSAPQHPYTRQLLNAEP 262
           VE   T E+F  PQH YTRQL+NA P
Sbjct: 510 VEHATTEEIFRNPQHAYTRQLINATP 535