Pairwise Alignments

Query, 530 a.a., microcin C ABC transporter ATP-binding protein YejF from Dickeya dianthicola ME23

Subject, 536 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein from Phaeobacter inhibens DSM 17395

 Score =  578 bits (1489), Expect = e-169
 Identities = 299/522 (57%), Positives = 385/522 (73%), Gaps = 2/522 (0%)

Query: 5   PLLEIRDLSIAFRNGGQQRQVVDQVSLSIEAGETLALVGESGSGKSVTALSVLRLLPSPP 64
           PLL +RDL ++FR  G+  + V  VS S+  GET+ALVGESGSGKSV+ALS + LL    
Sbjct: 13  PLLSVRDLRVSFRQDGKVTEAVRGVSFSVGRGETVALVGESGSGKSVSALSTVSLLGDSA 72

Query: 65  VVYLHGDILFAGESLLNASEQRLRQVRGDRIAMIFQEPMVSLNPLHTIEKQLAEVLSLHR 124
            V   G + + G  ++ ASE+ LRQVRG+ I+ IFQEPM SLNPLHTIEKQLAE L+LH+
Sbjct: 73  TV--SGSVTYDGTEMVGASERHLRQVRGNDISFIFQEPMTSLNPLHTIEKQLAESLALHQ 130

Query: 125 GMRRDAARGEIVGCLERVGIRQAARRLADFPHQLSGGERQRVMIAMALLTQPDLLIADEP 184
           G+   AAR  IV  L RVGIR A  RL  +PHQLSGG+RQRVMIAMAL  +PD+LIADEP
Sbjct: 131 GLGGAAARERIVDLLNRVGIRDAETRLDAYPHQLSGGQRQRVMIAMALANKPDILIADEP 190

Query: 185 TTALDVTVQAQILDLLNELKQELNMGLLFITHNLNIVRRLADRVAVMQAGRCVEQNRTRE 244
           TTALDVT+Q QILDLL +LK    MGLLFITH+L+IVRR+ADRV VMQAG  VE   T E
Sbjct: 191 TTALDVTIQVQILDLLADLKASEGMGLLFITHDLSIVRRIADRVCVMQAGEIVESGPTAE 250

Query: 245 LFSAPQHPYTRQLLNAEPTGEAPPLEPTASTLLDVRELGVSFPIRRGLLRRTVGEKSVLQ 304
           +F+ PQHPYTR+LL+AEPTG+  P+   A  L+   +L V FPI++G L+RTVG    + 
Sbjct: 251 IFANPQHPYTRKLLDAEPTGQPQPVSKDAKELIRTEDLKVWFPIQKGFLKRTVGHVKAVN 310

Query: 305 ALSFSLRRGESIGLVGESGSGKSTTGLALLRLLRSRGEIWFDGQPLHRFNHKQMLPVRRR 364
             S S+R GE++G+VGESGSGK+T  LA++RL+ S G + F GQ L +++ + +  +R  
Sbjct: 311 PTSLSVRAGETLGIVGESGSGKTTLALAIMRLIASEGRVEFQGQDLRQWSTRDLRRLRAD 370

Query: 365 IQVVFQDPNGSLNPRLNVEQIIAEGLRVHHPLSPAEQTQRVIQSMQEVGLDPDSRHRYPS 424
           +Q+VFQDP G+L+PR+   QIIAEGL +H+     +    V + M EVGLDP    RYP 
Sbjct: 371 MQIVFQDPFGALSPRMTCAQIIAEGLAIHNVDQDRDPRDLVAEVMSEVGLDPAFMDRYPH 430

Query: 425 EFSGGQRQRIAIARALILQPELLILDEPTSSLDRTVQAQILTLLKTLQQTHQLAYLFISH 484
           EFSGGQRQRIAIARA++L+P+L++LDEPTS+LD TVQ QI+ LL+ LQ+ + LAYLFISH
Sbjct: 431 EFSGGQRQRIAIARAMVLRPKLVVLDEPTSALDMTVQVQIVNLLRDLQERYGLAYLFISH 490

Query: 485 DLHVVRSLCHQVIVLRHGEVVEQGECRQLFEHPQQDYTRQLL 526
           DL+VVR++ H++IV++ G+VVE G   +LF +P   YT+QLL
Sbjct: 491 DLNVVRAMSHKMIVMKQGDVVEAGSAAELFNNPSDPYTQQLL 532



 Score =  179 bits (455), Expect = 2e-49
 Identities = 105/265 (39%), Positives = 164/265 (61%), Gaps = 16/265 (6%)

Query: 3   AHPLLEIRDLSIAF--RNGGQQRQV-----VDQVSLSIEAGETLALVGESGSGKSVTALS 55
           A  L+   DL + F  + G  +R V     V+  SLS+ AGETL +VGESGSGK+  AL+
Sbjct: 279 AKELIRTEDLKVWFPIQKGFLKRTVGHVKAVNPTSLSVRAGETLGIVGESGSGKTTLALA 338

Query: 56  VLRLLPSPPVVYLHGDILFAGESLLNASEQRLRQVRGDRIAMIFQEPMVSLNPLHTIEKQ 115
           ++RL+ S       G + F G+ L   S + LR++R D + ++FQ+P  +L+P  T  + 
Sbjct: 339 IMRLIAS------EGRVEFQGQDLRQWSTRDLRRLRAD-MQIVFQDPFGALSPRMTCAQI 391

Query: 116 LAEVLSLHRGMRRDAARGEIVGCLERVGIRQAARRLADFPHQLSGGERQRVMIAMALLTQ 175
           +AE L++H   +    R  +   +  VG+  A   +  +PH+ SGG+RQR+ IA A++ +
Sbjct: 392 IAEGLAIHNVDQDRDPRDLVAEVMSEVGLDPAF--MDRYPHEFSGGQRQRIAIARAMVLR 449

Query: 176 PDLLIADEPTTALDVTVQAQILDLLNELKQELNMGLLFITHNLNIVRRLADRVAVMQAGR 235
           P L++ DEPT+ALD+TVQ QI++LL +L++   +  LFI+H+LN+VR ++ ++ VM+ G 
Sbjct: 450 PKLVVLDEPTSALDMTVQVQIVNLLRDLQERYGLAYLFISHDLNVVRAMSHKMIVMKQGD 509

Query: 236 CVEQNRTRELFSAPQHPYTRQLLNA 260
            VE     ELF+ P  PYT+QLL A
Sbjct: 510 VVEAGSAAELFNNPSDPYTQQLLAA 534