Pairwise Alignments

Query, 601 a.a., DEAD/DEAH box helicase from Dickeya dianthicola ME23

Subject, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

 Score =  675 bits (1741), Expect = 0.0
 Identities = 337/587 (57%), Positives = 420/587 (71%), Gaps = 17/587 (2%)

Query: 3   FTLRPYQQEAVDATLAYFRQHTAPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVRELV 62
           +TLRPYQ ++V A + YFRQH+ PAVIVLPTGAGKSLVIAELARLARGRVLVLAHV+ELV
Sbjct: 2   YTLRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKELV 61

Query: 63  EQNHAKYCALGLQADIFAAGLNQHDSEGKVVFGSVQSVARHPDKFDDAFSLLIVDECHRI 122
           EQNHAKY   GL   IF+AGL + +++ +VVF SVQSV R+  +F + FSLL++DECHR+
Sbjct: 62  EQNHAKYEGYGLTGAIFSAGLGRKETDQQVVFASVQSVVRNLSEFQNQFSLLVIDECHRV 121

Query: 123 SDDENSQYQQIIQQAQQANPQLRLLGLTATPYRLGRGWIYQYHYHGMIRGDDGCLFRDCI 182
            DD+NS YQ++I    + NP +++LGLTATPYRLG GWIYQYH  G++R ++   FRDCI
Sbjct: 122 PDDKNSSYQKVITHLLELNPGMKVLGLTATPYRLGMGWIYQYHTRGLVRSEEPRFFRDCI 181

Query: 183 YELPLRYMIRHGFLVPPERLDMPVVQYDFSQLAARSDGLFNNGLFNNGLFNNGRFSDVEL 242
           +ELP+ Y++  GFL P + +D PV+ YDFSQL                  N GR+ + EL
Sbjct: 182 FELPIHYLLDEGFLTPAQLIDTPVMSYDFSQLKPA---------------NTGRYRESEL 226

Query: 243 NRELKRQQRVTPHIVRQITEYAANRRGVMIFAATVEHAREVAGLLPASEAALISGETPAP 302
           +  +++ QR TP IV QI E A  R+GVMIFAATV HA E+  LLP   AAL+ G+TP P
Sbjct: 227 DLVIEQSQRATPQIVAQIIELAKARQGVMIFAATVRHAEEIYRLLPTEHAALVIGDTPTP 286

Query: 303 QRDALIAAFKQQQLRYLVNVSVLTTGFDAPHVDVIAILRPTESVSLYQQIIGRGLRLFPG 362
           +RD +I AFKQQQ+++LVNVSVLTTGFDAPHVD+IAILRPTESVSLYQQI+GRGLRL  G
Sbjct: 287 ERDRIIQAFKQQQIKFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAAG 346

Query: 363 KSDCLILDYAGNPFDLYTPEVGHSKPHSDSQPVQVFCPQCGFANLFWGKCTDDGSVIEHY 422
           KSDCL+LDYAGN +DLY PEVG  KP SDS+ + + CP CGF N FWGK   +G +IEHY
Sbjct: 347 KSDCLVLDYAGNQYDLYQPEVGDPKPDSDSEIITIPCPACGFNNNFWGKLDANGFLIEHY 406

Query: 423 GRRCQGW-QADEQGRRQQCDYRFRFKSCPHCGAENDIAARRCQSCEAVLVDPDDMLKAAL 481
           GRRCQG+   DE G R+ C YRFR K C  CGA+NDIAAR C  C+  LVDPD  LK AL
Sbjct: 407 GRRCQGYFTDDETGEREHCGYRFRAKYCNECGADNDIAARICHECDTTLVDPDKKLKEAL 466

Query: 482 KLKDALVLRCSGMNLQHGADAKGE-WLRITYYDEDGADVSERFRLHTAAQRSAFTHVFLR 540
            LKDALV  C+ M+L+   DAKG+  L++TY+ +D   V + + L+T  Q+  F   F+R
Sbjct: 467 NLKDALVFECTDMSLKVHKDAKGKSQLQVTYHGQDAVQVHQFWPLNTPRQKQQFHDQFVR 526

Query: 541 AHQRAPGVPFQWQRADDVVAQQALLRAPDFVVARLQGKFWQVREKIF 587
            H      PF+      VV  Q   R P FV+AR  G+FW +R+K+F
Sbjct: 527 PHLADKHRPFEAATPAKVVDHQHRFRPPLFVIARKSGRFWTIRDKVF 573