Pairwise Alignments

Query, 601 a.a., DEAD/DEAH box helicase from Dickeya dianthicola ME23

Subject, 585 a.a., DNA damage response helicase (yejH or radD) (from data) from Marinobacter adhaerens HP15

 Score =  700 bits (1806), Expect = 0.0
 Identities = 353/601 (58%), Positives = 438/601 (72%), Gaps = 24/601 (3%)

Query: 3   FTLRPYQQEAVDATLAYFRQHTAPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVRELV 62
           F LRPYQ+EAVDATLA+FR+    AVIVLPTGAGKSLVIAELARLA+ ++LV+ HV+ELV
Sbjct: 5   FKLRPYQREAVDATLAHFRKTDESAVIVLPTGAGKSLVIAELARLAKRKILVVTHVKELV 64

Query: 63  EQNHAKYCALGLQADIFAAGLNQHDSEGKVVFGSVQSVARHPDKFDDAFSLLIVDECHRI 122
           EQNHAKY + GL   IF+AGL + +S  +V F SVQSV+ + D+F D +SL+I+DECHR+
Sbjct: 65  EQNHAKYQSYGLTGGIFSAGLKRKESHHQVTFASVQSVSANLDQFRDEYSLVIIDECHRV 124

Query: 123 SDDENSQYQQIIQQAQQANPQLRLLGLTATPYRLGRGWIYQYHYHGMIRGDDGCLFRDCI 182
           S +E SQYQ+II+  +Q N  L++LGLTATPYRL  GWIY+YHY G +RG+D   F+ CI
Sbjct: 125 SGEETSQYQRIIELLRQQNDSLKVLGLTATPYRLAMGWIYRYHYRGFVRGEDDKPFQHCI 184

Query: 183 YELPLRYMIRHGFLVPPERLDMPVVQYDFSQLAARSDGLFNNGLFNNGLFNNGRFSDVEL 242
           YELPL YMI  G+L  PE ++  V QYDFS L                    G +++ ++
Sbjct: 185 YELPLSYMINRGYLTRPELVNAAVAQYDFSALPKD---------------RFGEYAERDV 229

Query: 243 NRELKRQQRVTPHIVRQITEYAANRRGVMIFAATVEHAREVAGLLPASEAALISGETPAP 302
           N+ L + +RVT  I+ Q+ E AA R+GVMIFAATVEHAREVAG LP  E ALI+G T   
Sbjct: 230 NQLLSKHKRVTRAIIEQVVELAAERQGVMIFAATVEHAREVAGYLPEHETALITGATDLK 289

Query: 303 QRDALIAAFKQQQLRYLVNVSVLTTGFDAPHVDVIAILRPTESVSLYQQIIGRGLRLFPG 362
            RD LI  FKQ+QL+YLVNVSVLTTGFDAPHVD IAILRPT+SVSLYQQI+GRGLRL  G
Sbjct: 290 DRDLLIQRFKQRQLKYLVNVSVLTTGFDAPHVDFIAILRPTQSVSLYQQIVGRGLRLDEG 349

Query: 363 KSDCLILDYAGNPFDLYTPEVGHSKPHSDSQPVQVFCPQCGFANLFWGKCTDDGSVIEHY 422
           K DCL++DYAGN  +L+ PEVG  KP+ DS+PVQVFCP CGFAN+FWGK  DDG VIEHY
Sbjct: 350 KQDCLVIDYAGNHVNLHHPEVGEPKPNPDSEPVQVFCPGCGFANIFWGKTDDDGRVIEHY 409

Query: 423 GRRCQGWQADEQG----RRQQCDYRFRFKSCPHCGAENDIAARRCQSCEAVLVDPDDMLK 478
           GRRCQG      G    R QQCDYRFRFK CPHCGAENDIAAR C  C   ++DPDD L+
Sbjct: 410 GRRCQGLLEPVDGVQDERPQQCDYRFRFKECPHCGAENDIAARNCHQCHKAIIDPDDQLR 469

Query: 479 AALKLKDALVLRCSGMNLQHGADAKGEWLRITYYDEDGADVSERFRLHTAAQRSAFTHVF 538
            ALKLKDA+V+RC+G++L     A G  L+ITY+ EDG ++ E F      QR+ F  +F
Sbjct: 470 DALKLKDAMVIRCAGISLV----ADGSKLKITYHGEDGEELGESFDFSKPGQRAVFNKLF 525

Query: 539 LRAHQRAPGVPFQWQRADDVVAQQALLRAPDFVVARLQGKFWQVREKIFDYQGRYRRAHE 598
            R    +   P  +  AD+V+  +ALL APDFV+AR Q  +WQV+E++FDYQG++R+A+E
Sbjct: 526 GRRFANSQ-APKAFSSADEVLELEALLPAPDFVIARKQKHYWQVQERVFDYQGQFRKANE 584

Query: 599 L 599
           +
Sbjct: 585 V 585