Pairwise Alignments

Query, 244 a.a., response regulator transcription factor from Dickeya dianthicola ME23

Subject, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  107 bits (268), Expect = 2e-28
 Identities = 71/259 (27%), Positives = 133/259 (51%), Gaps = 29/259 (11%)

Query: 3   AIIVEDEFLAQQELSWLIKQ-HSQIEVAAVFDDGLDVLKYLQDNRVEVIFLDINIPSLDG 61
           A++ +DE L +  L+ L+ +    +E+ A  ++G   L+ ++ ++ +V+FLDI +P +DG
Sbjct: 8   AVLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMDG 67

Query: 62  VMLAKNISQFAHKPLIVFITAYKNHAVEAFELEAFDYILKPYHETRIVGMLQKLEAAWQQ 121
           + +A+ + Q    PL+VFITAY  +AV AFE  A DY+LKP   +R+    +KL     Q
Sbjct: 68  IEVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKL-----Q 122

Query: 122 QQLPTHASGDNRPAPMT-----------------INLVKDKRIIVTNIHDIYYAESHEKL 164
           QQL  + +  N  A +                  +   K + I +  ++++ Y ++ +K 
Sbjct: 123 QQLRRNVAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAEDKY 182

Query: 165 TFVY----TRRDEFVMSVNITEFCSRLPEAYFFRCHRSYCVNLSRIREIEPWFNNTYILK 220
             +Y        E+++  ++ E  ++L    F++ HRS  VN+ +I ++   F     + 
Sbjct: 183 LSLYKVHGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVTRDFGGKMWVH 242

Query: 221 LSDLDFQVPVSRSKVREFR 239
           +  L  Q+PVSR+    F+
Sbjct: 243 IDRL--QLPVSRALQHLFK 259