Pairwise Alignments

Query, 248 a.a., glutamine ABC transporter substrate-binding protein GlnH from Dickeya dianthicola ME23

Subject, 251 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

 Score =  122 bits (307), Expect = 5e-33
 Identities = 82/247 (33%), Positives = 131/247 (53%), Gaps = 5/247 (2%)

Query: 1   MKSLFKASL-AALALAFSLSGQAAEKSLIVATDTAFVPFEFKQGD-KYVGFDIDLWDAIA 58
           MKS  K  L AA +L       AAEK L + T+ A+ PF       K VGFD+D+  A+ 
Sbjct: 1   MKSYKKILLTAAASLIIGTQAFAAEK-LRIGTEGAYPPFNLIDASGKVVGFDLDISHALC 59

Query: 59  RQLNLNYTLKPMDFSGIIPALQTRNVDLALAGITITEERKRAIDFSDGYYNSGLLVMVRA 118
            ++ +   +   D+ GIIPAL     D   A +++TEERK A+DF+D YY + L  +   
Sbjct: 60  AKMKVECEVVTSDWDGIIPALNAGKFDFLAASMSVTEERKNAVDFTDHYYTNKLQFVAPK 119

Query: 119 DNQDIKGEQDLAGKMVAVKSGTGSVDYAKANI-KTRELRQFPNIDNAYLELGTNRADAVL 177
           + +    E  L GK++  +  T +  + + N+ +  +++ +   +NAYL+L + R D +L
Sbjct: 120 NVEFQTDEGYLKGKVIGAQRATIAGTWLEDNLDRVVDIKLYDTQENAYLDLASGRVDGIL 179

Query: 178 HDTPNILYFIKTAGNGKFKTVGESI-KAQQYGIAFPKGNDELRNQVNGALKTLRDNGTYA 236
            DT     ++K+     F+  GE +    +  IA  KGNDELR ++N AL  +  +GTY 
Sbjct: 180 ADTFVQWEWLKSDAGKNFEFKGEPVFDDDKIAIAVRKGNDELRERLNKALAEIIADGTYK 239

Query: 237 TLYQKWF 243
            +  K+F
Sbjct: 240 QINDKYF 246