Pairwise Alignments

Query, 311 a.a., tRNA dihydrouridine(16) synthase DusC from Dickeya dianthicola ME23

Subject, 362 a.a., Dihydrouridine synthase TIM-barrel protein nifR3 (NCBI) from Rhodospirillum rubrum S1H

 Score =  145 bits (365), Expect = 2e-39
 Identities = 97/237 (40%), Positives = 132/237 (55%), Gaps = 9/237 (3%)

Query: 3   VLLAPMEGVLDSLVRELLTEVNDYDLCITEFLRVVDSRLPVKAFYR-LCPELRRGSRTPS 61
           ++LAPM GV DS  R L    +DY  C   +  +V SR  ++   R + P L  G+    
Sbjct: 14  IMLAPMAGVTDSPFRRL---AHDYG-CPLSWTEMVASRELLRERARGVDPRLGGGAEAGR 69

Query: 62  GTRVRVQLLGQYPQWLAENAARAVELGSWGVDLNCGCPSKMVNGSGGGATLLKDPELIYR 121
                VQL G  P  +AE A R    G+  +D+N GCP + V G  GG+ L++D  L  R
Sbjct: 70  AGPFAVQLAGCDPLIMAEAARRVEGAGAELIDINMGCPVRKVVGGLGGSALMRDLPLAAR 129

Query: 122 AAKAMREAVPPSLPVTVKVRLGWDSGDRQ-FEIADAVAQAGASELVVHGRTKEDGYRAER 180
             +A+  AV  +LPV++K+RLGWD   R   E+A     AG S L VHGRT+   Y   R
Sbjct: 130 ILEAVVGAV--TLPVSLKMRLGWDDASRNAVELARLAESAGISRLTVHGRTRAQMYDG-R 186

Query: 181 INWAAIGEIRRRVRIPVIANGEIWDWQSAQDCMAVTGCDAVMIGRGALNVPNLSRVI 237
            +W AIG ++R V +PVIANG++ +   A++ +AVTG D VMIGR AL  P L   I
Sbjct: 187 ADWPAIGLVKRAVSLPVIANGDVTNLSEAREILAVTGADGVMIGRAALGAPWLPGAI 243