Pairwise Alignments

Query, 311 a.a., tRNA dihydrouridine(16) synthase DusC from Dickeya dianthicola ME23

Subject, 322 a.a., nifR3 family TIM-barrel protein (RefSeq) from Shewanella sp. ANA-3

 Score =  118 bits (296), Expect = 2e-31
 Identities = 84/243 (34%), Positives = 130/243 (53%), Gaps = 19/243 (7%)

Query: 2   RVLLAPMEGVLDSLVRELLTEVNDYDLCITEFL----RVVDSRLPVKAFYRLCPELRRGS 57
           ++++APM GV D   R L        L ++E L     V D+    K+  R+      G 
Sbjct: 11  QLIVAPMAGVTDQAFRNLCLRYGAA-LAVSEMLSSNPEVWDTD---KSRQRMTHSGEEGI 66

Query: 58  RTPSGTRVRVQLLGQYPQWLAENAARAVELGSWGVDLNCGCPSKMVNGSGGGATLLKDPE 117
           R+       VQ+ G  P+ +A+ A   VE G+  +D+N GCP+K VN    G+ L+++P 
Sbjct: 67  RS-------VQIAGADPELMAQAAQFNVEQGAHIIDINMGCPAKKVNKKLAGSALMQNPP 119

Query: 118 LIYRAAKAMREAVPPSLPVTVKVRLGWDSGDRQ-FEIADAVAQAGASELVVHGRTKEDGY 176
           L+    +A+  AV   +PVT+K+R GW+   R   +IA      G + L VHGRT++  Y
Sbjct: 120 LVKEILQAVVAAV--EVPVTLKIRTGWEPEHRNGVQIAQIAEDCGIASLAVHGRTRQCMY 177

Query: 177 RAERINWAAIGEIRRRVRIPVIANGEIWDWQSAQDCMAVTGCDAVMIGRGALNVPNLSRV 236
           R +   +  I  I++ V IPV+ANG+I   + A+  +  TG DA+MIGRGA   P + R 
Sbjct: 178 RGD-AEYDTIKAIKQNVSIPVVANGDIDSPEKARFVLDYTGVDALMIGRGAQGRPWIFRE 236

Query: 237 IKY 239
           I++
Sbjct: 237 IQH 239