Pairwise Alignments

Query, 670 a.a., excinuclease ABC subunit B from Dickeya dianthicola ME23

Subject, 671 a.a., excinuclease ABC, B subunit from Pseudomonas stutzeri RCH2

 Score =  956 bits (2470), Expect = 0.0
 Identities = 483/667 (72%), Positives = 567/667 (85%), Gaps = 5/667 (0%)

Query: 5   FKLHSDFKPAGDQPEAIRRLEDGLEDGLAHQTLLGVTGSGKTFTVANVIADLNRPTMVLA 64
           F+L + FKPAGDQPEAIR++ +G+E GL+HQTLLGVTGSGKTF++ANVIA + RPT+VLA
Sbjct: 4   FELVTRFKPAGDQPEAIRQMIEGIEAGLSHQTLLGVTGSGKTFSIANVIAHVQRPTLVLA 63

Query: 65  PNKTLAAQLYGEMKAFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRL 124
           PNKTLAAQLYGE KAFFP NAVEYFVSYYDYYQPEAYVPSSDTFIEKDAS+N+HIEQMRL
Sbjct: 64  PNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQMRL 123

Query: 125 SATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTQGMLIDQRAILRRLAELQYARN 184
           SATKALLER D ++V +VS IYGLGDP  YLKM+LH+ +G  +DQR +LRRL  LQY RN
Sbjct: 124 SATKALLERPDAIIVTTVSCIYGLGDPQSYLKMVLHVDRGDRLDQRELLRRLTGLQYTRN 183

Query: 185 DQAFARGTFRVRGEIIDIFPAESEDIALRVELFDEEVERLSLFDPLTGHIVQTVPRYTIY 244
           D  FAR TFRVRG++IDIFPAES+  A+R+ELFD+EVE LS FDPLTG +++ +PR+T Y
Sbjct: 184 DMDFARATFRVRGDVIDIFPAESDLEAVRIELFDDEVESLSAFDPLTGEVIRKLPRFTFY 243

Query: 245 PKTHYVTPRERILQAMEEIKVELADRRQVLLAGNKLLEEQRLAQRTTFDLEMMNELGYCS 304
           PK+HYVTPRE +L A+E+IK EL +R   L + NKL+E QRL QRT FDLEM+ ELGYC+
Sbjct: 244 PKSHYVTPRETLLDAIEKIKDELRERLDYLRSQNKLVEAQRLEQRTRFDLEMIMELGYCN 303

Query: 305 GIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQLGGMYRGDRARKETLVEY 364
           GIENYSR+LSGR  GEPPPTLFDYLPAD LLVIDESHV++PQ+G MY+GDR+RKETLVEY
Sbjct: 304 GIENYSRYLSGRDAGEPPPTLFDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETLVEY 363

Query: 365 GFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGGEVIDQVVRPTGLLDPQLE 424
           GFRLPSALDNRPM+F+E+EA+ PQTI+VSATPG YE E + G V++QVVRPTGL+DPQ+E
Sbjct: 364 GFRLPSALDNRPMRFDEWEAICPQTIFVSATPGPYEAEHA-GRVVEQVVRPTGLVDPQIE 422

Query: 425 VRPVTTQVDDLLSEIRKRAVINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVE 484
           VRP  TQVDDLLSEIRK  V  ERVLVTTLTKRMAEDLT+YL +H  RVRYLHSDIDTVE
Sbjct: 423 VRPALTQVDDLLSEIRKCVVKEERVLVTTLTKRMAEDLTDYLSDHDVRVRYLHSDIDTVE 482

Query: 485 RVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAAR 544
           RVEIIRDLRLG FDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAAR
Sbjct: 483 RVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAAR 542

Query: 545 NLNGKAILYADRITPSMERAMNETQRRREKQQAYNEQHGIVPQGLNKKIGDLLQIGQSAN 604
           NLNG+AILYAD +T SM+RAM+ET+RRR KQ A+NE +GIVP+G+ K + D+L+      
Sbjct: 543 NLNGRAILYADNVTGSMQRAMDETERRRNKQIAFNEANGIVPKGVTKDVRDILEGATVPG 602

Query: 605 GRGKGR--GKKAAEPAAQYQQ--LSPKALDQKIRELESQMLTHAQNLEFEEAARLRDEIH 660
            R K R    KAAE +A+Y+    SP  + ++IR+LE +ML+ A++LEFE AA  RDEIH
Sbjct: 603 SRSKKRRGEAKAAEESARYENELRSPSEITKRIRQLEEKMLSLARDLEFEAAAEARDEIH 662

Query: 661 ALREQFI 667
            LRE+ +
Sbjct: 663 KLRERLL 669