Pairwise Alignments

Query, 597 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

Subject, 553 a.a., ABC-type uncharacterized transport system, duplicated ATPase component from Pseudomonas stutzeri RCH2

 Score =  461 bits (1187), Expect = e-134
 Identities = 260/545 (47%), Positives = 342/545 (62%), Gaps = 26/545 (4%)

Query: 5   VLRIEQLNTAFRVNGEWLNVVQDLSFEIGERETVALVGESGSGKSVTALSIMRLLAGPQV 64
           ++ +  L   F    +   VV+ ++F+I + ET+ALVGESGSGKSVTA SI+RLL  P  
Sbjct: 10  LVEVRDLAVEFVTGEQVQRVVEGVTFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLA 69

Query: 65  R-TTGRALFDGRDLLALPAREMQHIRGNRIGMVFQEPMTSLNPVLKIGTQITEVLRRHRG 123
           R   G+ LF G+DLL    + M+ IRGNRI MVFQEPMTSLNP+  +G QI EVL  H+G
Sbjct: 70  RHPQGQILFHGQDLLKADEKAMRKIRGNRIAMVFQEPMTSLNPLHTVGKQINEVLEIHKG 129

Query: 124 MDHAGARAEAVRLLEKVRIPAARSRLDEYPLSFSGGMRQRVVIAIALACHPRLLIVDEPT 183
           +    A A  + LLE V IP  R R+  YP   SGG RQRVVIA+ALA  P LLI DEPT
Sbjct: 130 LRGKAATARTLELLELVGIPEPRKRIRAYPHELSGGQRQRVVIAMALANEPELLIADEPT 189

Query: 184 TALDVTIQAQILALIKTLQDEEGMSILFITHDMGVVAEVADRTMVMYHGAGVEMADTRRL 243
           TALDVT+Q +IL L+K LQ   GM++L I+HD+ +V  +A R  VM  G  VE A    L
Sbjct: 190 TALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQRGRVVEQALCEDL 249

Query: 244 FRAPQHPYSKTLFSALPRLGDMADSRLPRRFALFGQSAAASAPLADTVTPGEPVLAVRGL 303
           FRAPQHPY++ L +A P  G +A    P                        P+L V  L
Sbjct: 250 FRAPQHPYTQELLAAEPSGGPVAVEEAP------------------------PLLEVDDL 285

Query: 304 IKRFEVKSGWLRRVTGRVHAVENVSFSLQPGETLSLVGESGCGKSTAGRAILRLLEPNGG 363
              F +K G LRR    + AV+ V+FSL  G+TL +VGESG GKST G AILRLL  + G
Sbjct: 286 RVWFPIKKGLLRRTVDHIKAVDGVNFSLPKGQTLGIVGESGSGKSTLGLAILRLL-GSRG 344

Query: 364 AVSLCGENMLAAGASALAGLRMRAQMIFQDPYDSLNPRLTVGCAIAEPMISHGLASARQA 423
            +   G+++ +     +  LR + Q++FQDP+ SL+PR++VG  + E +  H + +A++ 
Sbjct: 345 EIRFQGQHLQSMSQRQVRPLRRQMQVVFQDPFGSLSPRMSVGQIVGEGLHIHRMGNAKEQ 404

Query: 424 RQKVAELLEKVGLQADMAERYPHQFSGGQRQRLCIARALALNPRVIIADEAVSALDMTVK 483
            Q + E L +VGL  +   RYPH+FSGGQRQR+ IARAL L P +I+ DE  SALD TV+
Sbjct: 405 EQAIIEALVEVGLDPETRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQ 464

Query: 484 AQIVNLLLDLQQQLGLAYLFISHDMAVVERISHRVAVMYQGEIVEIGPRQAVFNDPQHPY 543
            Q+V LL  LQ +  L YLFISHD+AVV  +SH++ V+ QG++VE G    +F  PQHPY
Sbjct: 465 RQVVELLRSLQAKYNLTYLFISHDLAVVRALSHQMMVVKQGQVVEQGAAADIFAAPQHPY 524

Query: 544 TRRLL 548
           T++LL
Sbjct: 525 TQQLL 529



 Score =  191 bits (485), Expect = 7e-53
 Identities = 118/260 (45%), Positives = 157/260 (60%), Gaps = 12/260 (4%)

Query: 308 EVKSGWLRRVTGRV--HAVENVSFSLQPGETLSLVGESGCGKSTAGRAILRLL------E 359
           EV+   +  VTG      VE V+F ++ GETL+LVGESG GKS    +ILRLL       
Sbjct: 12  EVRDLAVEFVTGEQVQRVVEGVTFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLARH 71

Query: 360 PNGGAVSLCGENMLAAGASALAGLR-MRAQMIFQDPYDSLNPRLTVGCAIAEPMISHGLA 418
           P G  +   G+++L A   A+  +R  R  M+FQ+P  SLNP  TVG  I E +  H   
Sbjct: 72  PQG-QILFHGQDLLKADEKAMRKIRGNRIAMVFQEPMTSLNPLHTVGKQINEVLEIHKGL 130

Query: 419 SARQARQKVAELLEKVGLQADMAE--RYPHQFSGGQRQRLCIARALALNPRVIIADEAVS 476
             + A  +  ELLE VG+         YPH+ SGGQRQR+ IA ALA  P ++IADE  +
Sbjct: 131 RGKAATARTLELLELVGIPEPRKRIRAYPHELSGGQRQRVVIAMALANEPELLIADEPTT 190

Query: 477 ALDMTVKAQIVNLLLDLQQQLGLAYLFISHDMAVVERISHRVAVMYQGEIVEIGPRQAVF 536
           ALD+TV+ +I+ LL +LQ +LG+A L ISHD+ +V RI+HRV VM +G +VE    + +F
Sbjct: 191 ALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQRGRVVEQALCEDLF 250

Query: 537 NDPQHPYTRRLLAAVPVPDP 556
             PQHPYT+ LLAA P   P
Sbjct: 251 RAPQHPYTQELLAAEPSGGP 270



 Score =  158 bits (400), Expect = 5e-43
 Identities = 95/264 (35%), Positives = 155/264 (58%), Gaps = 19/264 (7%)

Query: 4   PVLRIEQLNTAFRVNG-------EWLNVVQDLSFEIGERETVALVGESGSGKSVTALSIM 56
           P+L ++ L   F +         + +  V  ++F + + +T+ +VGESGSGKS   L+I+
Sbjct: 278 PLLEVDDLRVWFPIKKGLLRRTVDHIKAVDGVNFSLPKGQTLGIVGESGSGKSTLGLAIL 337

Query: 57  RLLAGPQVRTTGRALFDGRDLLALPAREMQHIRGNRIGMVFQEPMTSLNPVLKIGTQITE 116
           RLL      + G   F G+ L ++  R+++ +R  ++ +VFQ+P  SL+P + +G  + E
Sbjct: 338 RLLG-----SRGEIRFQGQHLQSMSQRQVRPLR-RQMQVVFQDPFGSLSPRMSVGQIVGE 391

Query: 117 VLRRHRGMDHAGARAEAV--RLLEKVRIPAARSRLDEYPLSFSGGMRQRVVIAIALACHP 174
            L  HR M +A  + +A+   L+E    P  R R   YP  FSGG RQR+ IA AL   P
Sbjct: 392 GLHIHR-MGNAKEQEQAIIEALVEVGLDPETRHR---YPHEFSGGQRQRIAIARALVLKP 447

Query: 175 RLLIVDEPTTALDVTIQAQILALIKTLQDEEGMSILFITHDMGVVAEVADRTMVMYHGAG 234
            L+++DEPT+ALD T+Q Q++ L+++LQ +  ++ LFI+HD+ VV  ++ + MV+  G  
Sbjct: 448 ALILLDEPTSALDRTVQRQVVELLRSLQAKYNLTYLFISHDLAVVRALSHQMMVVKQGQV 507

Query: 235 VEMADTRRLFRAPQHPYSKTLFSA 258
           VE      +F APQHPY++ L  +
Sbjct: 508 VEQGAAADIFAAPQHPYTQQLLES 531