Pairwise Alignments

Query, 512 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

Subject, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  150 bits (379), Expect = 1e-40
 Identities = 124/504 (24%), Positives = 219/504 (43%), Gaps = 49/504 (9%)

Query: 6   FVAGLMTLMPIAQAADLTIGLASSTTSMDPQFYVGGANSAMARNLFDGLVNQNEKQHITP 65
           F A +     +A   +L  G  +   S+DP    G   S + R+L +GLVNQ+   ++ P
Sbjct: 26  FAANVPAGTKLAPVQELVRGNGTEVASLDPHKTEGVPESNVIRDLLEGLVNQDANGNVVP 85

Query: 66  ALAVSWKAIDDTTWQFRLRPNVKFHDGADVNARDVVASVKRVALAAKNSPSAYTPYVADI 125
            +A SW+  D+ T+ F +R + K+ +G  V A D V S +R    A  SP ++      +
Sbjct: 86  GVAESWETTDNKTFTFHIRKDAKWSNGDPVTAHDFVYSFQRAVDPATASPYSWYMEYTKM 145

Query: 126 SEIREI-----------------DPLTVEIKTKVPAALLLNNLSRIAILPARLVDQPTDV 168
              +EI                   L  E++T VP  +++   + +  +    V++  D 
Sbjct: 146 KNAKEIIAGEKDKSTLGAKAVDDHTLVFELETAVPYFVMMMGHTTVKPIHKATVEKFGDQ 205

Query: 169 LNGGKDVIGTGPFKFVSYTPDDKVVLSRNDHYWGGK-AEWDTVTLRVIKNSSARIAALLS 227
               ++ +G G +    +  ++++ L RN  YW  K    + VT   I+N  A +   LS
Sbjct: 206 WTKPENFVGNGAYVLDKWVVNERLELKRNPQYWDDKNTVLNKVTYLPIENQVAEMNRFLS 265

Query: 228 GDVDMIESVPTADRAAIARQQAFATESVPGNRILYLHPDQDRDVSPFAKGDDGKNPLRKA 287
           G++ +   +P      + ++   + + V G    Y +   ++           K P    
Sbjct: 266 GEIQITNELPLEHFKRLKKEHPESVQ-VQGQLCTYYYGFNNK-----------KPPFDDV 313

Query: 288 EVRQAMSLAINRDALVQRILDGQGLPSSQLVPQGYPGYSANIPA-----PVYDLAQAKQK 342
            VR+A+S AI+RD +   IL     P+  L P+   G+S  +PA         +A+AK+ 
Sbjct: 314 RVRKALSYAIDRDVVSDAILGQGQKPAYFLTPEITAGFSPEMPAYGKMTQKERIAEAKKL 373

Query: 343 LTAAGY----PNGFTLTFHASNDRYPNDAKIAQALGQMF-SQAGIKTEVVTMPGNVYFAK 397
           L  AGY    P  FTL ++ S     N  KIA A+  M+ +  G+   +       Y   
Sbjct: 374 LEEAGYNKSNPLKFTLLYNTSE----NHKKIATAIQSMWKTSLGVDIALENQEWKTYLDT 429

Query: 398 AAQREFSLVMGGAAIETGEASGVLGPLLETFGPNAGQGNRGRYSNAEFDKLLNQARATLD 457
             Q  F +   G   +  EAS  L  +L     ++   N  +Y +AE+D ++ +A+ +  
Sbjct: 430 RRQGNFDVTRAGWCGDYNEASSFLTLML-----SSNTSNDPQYHSAEYDAVIEKAKTSTS 484

Query: 458 EPQRDALLQQATELAVKEQGVIPL 481
           E +R  L   A +L  ++  + P+
Sbjct: 485 EEERQKLYADAEKLLARDMPIAPI 508