Pairwise Alignments

Query, 512 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

Subject, 526 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  207 bits (527), Expect = 7e-58
 Identities = 149/489 (30%), Positives = 230/489 (47%), Gaps = 27/489 (5%)

Query: 17  AQAADLTIGLASSTTSMDPQFYVGGANSAMARNLFDGLVNQNEKQHITPALAVSWKAIDD 76
           A AA L  G  +   S+DP      +N A   ++++GL+       I PALA  WK ID 
Sbjct: 26  ASAATLRWGSRADIYSLDPDSVPSTSNLAFLNHIYEGLIRYGPNFEIEPALATEWKLIDS 85

Query: 77  TTWQFRLRPNVKFHDGADVNARDVVASVKRVALAAKNSPSAYTPYVADISEIREIDPLTV 136
             W+F LR  VKFHDGAD  A DVVAS+ RV+            YV     ++++D  TV
Sbjct: 86  KHWRFTLRKGVKFHDGADFTADDVVASMNRVSDPTSPLRGNIPLYVG----VKKVDDFTV 141

Query: 137 EIKTKVPAALLLNNLSRIAILPARLV-----DQPTDVLNGGKDVI-----GTGPFKFVSY 186
           +I+   P+AL LN++S I +  A+ +     ++PTD+ +  ++       GTGPFK  S 
Sbjct: 142 DIEVSAPSALFLNDMSNIFMFSAKWLKDNNAEKPTDIASNTENYATHNTNGTGPFKLESR 201

Query: 187 TPDDKVVLSRNDHYWGGKA-EWDTVTLRVIKNSSARIAALLSGDVDMIESVPTADRAAIA 245
            PD K VL  ND +W  K    D +    I +++ R+AALLS ++D+++S P  D   + 
Sbjct: 202 VPDSKTVLLVNDQWWDQKKHNLDRIEYIPISSAATRVAALLSSEIDLLDSAPIQDLPRLE 261

Query: 246 RQQAFATESVPGNRILYLHPDQDRDVSPFAKGDDGK-NPLRKAEVRQAMSLAINRDALVQ 304
                        R +++        +   K +DG+ NP     VRQA+  +I+RD + +
Sbjct: 262 SSPGITVSKRTELRTVFI------GFNGKEKLEDGRPNPFLDLRVRQAVEASIDRDLINK 315

Query: 305 RILDGQGLPSSQLVPQGYPGYSANIPAPVYDLAQAK--QKLTAAGYPNGFTLTFHASNDR 362
           +I+ G   PS  L+     GY+ ++    Y  A +K  QKL           T+   ND 
Sbjct: 316 KIMRGLARPSGSLIAPEIAGYAKSL--DTYQPADSKLAQKLLEDAGQKDLAFTYLCMNDE 373

Query: 363 YPNDAKIAQALGQMFSQAGIKTEVVTMPGNVYFAKAAQREFSLV-MGGAAIETGEASGVL 421
             N+  I   +  M  +AG +  +   P  V   K    +  +  +  A   T +A  +L
Sbjct: 374 SINEEDICSGIANMLKRAGFQPTIDMGPRAVQQPKRTNGKADMFNLSWANEPTLDAYSLL 433

Query: 422 GPLLETFGPNAGQGNRGRYSNAEFDKLLNQARATLDEPQRDALLQQATELAVKEQGVIPL 481
             +L T   + G  N G +S  E D L+ +A    D  +R AL +QA ++A  +  +IPL
Sbjct: 434 SQVLSTRSGSTGVSNYGGWSYPELDDLVKKAAQEPDTAKRLALEEQALKIAKDKAILIPL 493

Query: 482 LFLSNTWAM 490
                 W M
Sbjct: 494 HQQPIAWGM 502