Pairwise Alignments

Query, 415 a.a., type III PLP-dependent enzyme from Dickeya dianthicola ME23

Subject, 417 a.a., diaminopimelate decarboxylase from Vibrio cholerae E7946 ATCC 55056

 Score =  137 bits (345), Expect = 6e-37
 Identities = 117/376 (31%), Positives = 171/376 (45%), Gaps = 14/376 (3%)

Query: 12  LQQQHVDPLAAFVYDLTALRRHVSEVMAALPPGVELY-YAIKANSEKPILDALAPLVHGF 70
           L  Q+  PL  +VY    L RH      ++     L  YA+KANS   +L+ LA L  GF
Sbjct: 22  LANQYGTPL--YVYSRATLERHWHAFDKSVGDYPHLICYAVKANSNLGVLNTLARLGSGF 79

Query: 71  EISSGGEIARV-AGCATRKPFVFSGPGKLDSDFDLALAQGVEAIHVESRHEIARLQQRAK 129
           +I S GE+ RV A        VFSG GK +++   AL   ++  +VES  E+ RL + A 
Sbjct: 80  DIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESEPELQRLNKVAG 139

Query: 130 RHGVVQPVFIRINPELASSLTSKLAMAGTPTPFGMDEADLADAVRDVDNASHLQLKGFHV 189
             GV  P+ +RINP++ +     ++       FG+     A   R   +  +L + G   
Sbjct: 140 ELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAQVYRLAHSLPNLDVHGIDC 199

Query: 190 HAMSHQMVVARHQQLLDLYLTRWPQWKALSAHPQPITHLNVGGGIGVPYLTPARFDWPAL 249
           H  S    +A      D  L      KA   H   I HL+VGGG+GV Y           
Sbjct: 200 HIGSQLTALAPFIDATDRLLALIDSLKAEGIH---IRHLDVGGGLGVVYRDELPPQPSEY 256

Query: 250 CDYLRTRLAQQPDAPVIRFEPGRFISAYCGYYAIEVLDKKRSHGKHFLVCRGGTHQFRLP 309
              L  RL +  D  +I FEPGR I+A  G    +V   K +  K+F +     +    P
Sbjct: 257 AKALLDRLERHRDLELI-FEPGRAIAANAGVLVTKVEFLKHTEHKNFAIIDAAMNDLIRP 315

Query: 310 AAQGHDHPVIHLPLTAAPTTGEMRDWTVVGQLCTPKDVLSRDQRLTDVNIGDLLVLPLAG 369
           A       +I L     P  GE + + +VG +C   D L +D+ L  +  GDLL +  +G
Sbjct: 316 ALYQAWQDIIPL----RPRQGEAQTYDLVGPVCETSDFLGKDRDLV-LQEGDLLAVRSSG 370

Query: 370 AYGYNISHADFLCHPR 385
           AYG+ +S +++   PR
Sbjct: 371 AYGFTMS-SNYNTRPR 385