Pairwise Alignments

Query, 575 a.a., hydrogenase large subunit from Dickeya dianthicola ME23

Subject, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

 Score =  182 bits (461), Expect = 3e-50
 Identities = 120/372 (32%), Positives = 193/372 (51%), Gaps = 6/372 (1%)

Query: 187 VVPIGPLHITSDEPGHFRLFVDGEQIIDADYRLFYVHRGMEKLAETRMGYNEVTFLSDRV 246
           VVPIGP+H    EP   +L V+GE +  A+  + YVHRG+E++ E +  Y +   LS+RV
Sbjct: 3   VVPIGPIHPILKEPLRIKLLVEGENVKGAEIDMGYVHRGIERIMEGKH-YLKCIHLSERV 61

Query: 247 CGICGFTHSVAYTSSIENALGVVVPARAHTIRSILLEVERLHSHLLNIGLSSHFVGFDTG 306
           CGIC + H+ ++   IEN   + VP +A  +R I  E+ER+HSHL+   + +  +  +T 
Sbjct: 62  CGICSYIHTQSFAECIENMCDIEVPEKAKYLRVITCELERIHSHLIAAAVYNLTIEHETL 121

Query: 307 FMQFFRVREKSMQIAEMLTGARKTYGLNLIGGIRRDILKEDRLKTIRLIREMREEVTQLT 366
            +    VRE  M + E++TG R   G N++GG+R D+ KE   K  + I E  E+V  + 
Sbjct: 122 GIWMLNVRESIMDLLELITGNRVNMGFNVVGGVRLDLNKEILDKIHKKIDEFEEDVKNII 181

Query: 367 DMLLNTANMAQRTQGVGVLNRQVARDYSPVGPMIRASGF-QRDVRIDHPFAGYLDLPMEL 425
           ++      +  R++ +G +  +        GP+ RASG  + D RI H    Y  L  + 
Sbjct: 182 EVFETGPLIGMRSKHIGKIGYKEIMKTRAAGPVARASGIPESDWRIRH--ETYKALNFKP 239

Query: 426 HHLDGGDVYSRVLVRVREVFTSLAMIEFGLDNMPDGPILNEHINYQPHKFALGFTEAPRG 485
              + GD Y+R++VR  EV TS+ +I   L++  +   +  +           + EA RG
Sbjct: 240 DWRNEGDNYARMMVRHDEVLTSVELIRRALEHYAESSGIVRNKAEIRATEGEWYNEAHRG 299

Query: 486 EDIHWSMTGDNQKLFRWRCRAATYANWPVLRFMLRG-NTISDAPLIIGSLDPCYSCTDR- 543
           E  +     D   + R   R  T  N    ++M++   TI+DA     S+DPC SCT+R 
Sbjct: 300 EVYYKIAITDGGLIKRIIIRTPTVMNLEAYKYMIKDCPTIADAVATYTSIDPCVSCTERT 359

Query: 544 VTLVDVRKKKVT 555
           + L D+   K++
Sbjct: 360 IQLKDLNTGKLS 371