Pairwise Alignments

Query, 575 a.a., hydrogenase large subunit from Dickeya dianthicola ME23

Subject, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

 Score =  186 bits (471), Expect = 2e-51
 Identities = 127/374 (33%), Positives = 199/374 (53%), Gaps = 12/374 (3%)

Query: 188 VPIGPLHITSDEPGHFRLFVDGEQIIDADYRLFYVHRGMEKLAETRMGYNEVTFLSDRVC 247
           + IGP+H T  EP   RLF++ E + DA+  +   HRG+E+L E  +   +   L +++C
Sbjct: 6   IAIGPVHSTMLEPHRLRLFIEDEIVKDAELTIGVNHRGVERLMEG-LPVEKACILCEKIC 64

Query: 248 GICGFTHSVAYTSSIENALGVVVPARAHTIRSILLEVERLHSHLLNIGLSSHFVGFDTGF 307
           GIC   H  +    +E    + +P RA+ IR I+ E+ERLHSH L  G +   +G +T  
Sbjct: 65  GICSHIHLWSAARLVEIGCNIEIPERANHIRIIVEELERLHSHTLLFGHAFEILGHETMS 124

Query: 308 MQFFRVREKSMQIAEMLTGARKTYGLNLIGGIR-RDILKEDRLKTI-RLIREMREEVTQL 365
           M+ F +RE  MQ+   ++G+R  Y   +IGGIR R  + E ++  I   I +  E + + 
Sbjct: 125 MRCFMLREPIMQVFFEISGSRVHYSCPIIGGIRPRCNISETQIPHILDKISKYEEGLNKF 184

Query: 366 TDMLLNTANMAQRTQGVGVLNRQVARDYSPVGPMIRASGFQRDVRIDHPFAGYLDLPMEL 425
            + +LN   +  R + VGV++R+ A  +  VGP  R S  + D+R       Y     + 
Sbjct: 185 LERMLNDPMIISRVKDVGVMDRKTAAKFHAVGPTARGSNVKSDMRKWGWVPEYDPYDFDE 244

Query: 426 HHLDGGDVYSRVLVRVREVFTSLAMIEFGLDNMPDGP---ILNEHINYQPHKF--ALGFT 480
              D GDV++R+ VR  E   S+ +I   LD + D     I N   NY+ H+F     +T
Sbjct: 245 ILFDSGDVFARLAVRFYECLESVKIIRQALDALKDTSDKRIYNP--NYELHEFKPINCYT 302

Query: 481 EAPRGEDIHWSMTGDNQKLFRW-RCRAATYANWPVLRFMLRGNTISDAPLIIGSLDPCYS 539
           EA RGE  ++S   D++ L R  + R  T  N   +  +++G  +SDA LII S DPC++
Sbjct: 303 EAQRGEQ-YYSYGLDDEGLVRQAKIRTPTATNLGAMEDIVKGYHVSDAELIIASCDPCFT 361

Query: 540 CTDRVTLVDVRKKK 553
           CTDR+ ++    KK
Sbjct: 362 CTDRLMVLKEPFKK 375