Pairwise Alignments

Query, 490 a.a., PTS transporter subunit EIIC from Dickeya dianthicola ME23

Subject, 523 a.a., PTS N-acetylmuramic acid transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

 Score =  350 bits (898), Expect = e-101
 Identities = 210/544 (38%), Positives = 296/544 (54%), Gaps = 88/544 (16%)

Query: 1   MSTLGYLQKVGRALMVPVATLPAAAILMGVGYWIDPIGWGSESALAALLIKSGAAIIEHM 60
           M+ LGY QK+G+ALM+P+ATLP AA+L+ +G   D +G          +  +G AI   +
Sbjct: 1   MNILGYAQKLGKALMLPIATLPVAALLLRLGQ-PDLLG-------IPFMAAAGDAIFSQL 52

Query: 61  AVLFAVGVAYGMSKDKDGAAALSGFVGYLVLTTLCSPAAVSMIQHIPLAEVPKAFSKIEN 120
            +LF +G+A G+SKD  GAA L+G V Y VL+        S+                  
Sbjct: 53  PLLFGLGIAIGLSKDGSGAAGLAGAVAYFVLSATAKTIDASINMSF-------------- 98

Query: 121 QFIGILVGVISAEIYNRYGQIELPKALSFFNGRRLVPILVSLLMIVVAFVLMYVWPVIYN 180
            F GI  G+I+   YN +    LP+ L+FF G+RLVPI+  L  +V   +   +WP I  
Sbjct: 99  -FGGIFAGIIAGHSYNAFHTTRLPEWLAFFAGKRLVPIMAGLFALVAGALSGVIWPSIQG 157

Query: 181 ALVSFGEHIQQMGSAGAGIYAFFNRLLIPVGLHHALNSVFWFDVAGINDIPNFLSGQQAI 240
            L +    +   G+ G  +Y   NR LIPVGLHH LNS FWF +    +I   +SG QA 
Sbjct: 158 GLDALAHAVSTSGALGQFVYGTLNRALIPVGLHHVLNSYFWFGMGTCQEI--LVSGAQA- 214

Query: 241 DAGKAI-------------------------------PGIT------------------- 250
            AG+A+                               P IT                   
Sbjct: 215 -AGQALPALEKLCVDPALAKTLVVGQEHTFAFKNAVTPEITAVVKEVTEVVKSGDLHRFF 273

Query: 251 ------GRYQAGFFPIMMFGLPGAALAIYHCARPENRSRVAGIMVAAALAAFFTGITEPL 304
                 G +  GFFP+MMFGLPGAALA+Y  A  E R +V G + + A  +F TGITEPL
Sbjct: 274 GGDKSAGVFMNGFFPVMMFGLPGAALAMYLAAPAERRHQVGGALFSVAFCSFLTGITEPL 333

Query: 305 EFSFMFVAPVLYVLHAVLTGISVFIAASMHWIAGFGFSAGLVDMVLSTRNPLATHWYMLL 364
           EF F+F+AP LY +HAV TG+S+ +A     + GFGFSAGL+D +L+    LAT    L 
Sbjct: 334 EFMFVFLAPALYAMHAVFTGLSLVVANMFGTLHGFGFSAGLIDFLLNW--GLATKPATLF 391

Query: 365 LQGAVFFVIYYGVFRFTITRFNLMTPGREAAVTQTVSESAPAPAGNSQSMARGYLQAIGG 424
           + G  FF +Y+  F F I  FNL +PGRE    +T ++SA A  G+   +AR YL+A+GG
Sbjct: 392 VIGLAFFALYFFTFTFAIRAFNLKSPGREDEEVETETDSADASKGD---LARQYLKALGG 448

Query: 425 KDNLTGIDACITRLRLSVKDSNLVDESAARNVGAVGVIRLNKQSVQIVVGTQAENIAAAL 484
            +NLT IDACITRLRL++KD ++ DE+  + +GA GV++L + ++Q+++G  AE +A  +
Sbjct: 449 HENLTSIDACITRLRLTLKDRSVADEAVLKKLGAKGVVKLGENNLQVILGPLAEIVAGEM 508

Query: 485 REVS 488
           + +S
Sbjct: 509 KAIS 512