Pairwise Alignments

Query, 490 a.a., PTS transporter subunit EIIC from Dickeya dianthicola ME23

Subject, 591 a.a., N-acetylglucosamine-specific PTS system, IIBC components (nagE) (from data) from Burkholderia phytofirmans PsJN

 Score =  344 bits (883), Expect = 4e-99
 Identities = 193/497 (38%), Positives = 289/497 (58%), Gaps = 52/497 (10%)

Query: 7   LQKVGRALMVPVATLPAAAILMGVGYWIDPIGWGSESALAALLIKSGAAIIEHMAVLFAV 66
           +Q++GRALM+P+A LP A +L+ +G          +     ++  +G AI +++ +LFA+
Sbjct: 9   IQRLGRALMLPIAVLPVAGLLLRLGQ--------PDVFNIKMIADAGGAIFDNLPLLFAI 60

Query: 67  GVAYGMSKDKDGAAALSGFVGYLVLTTLCSPAAVSMIQHIPLAEVPKAFSKIENQFI-GI 125
           GVA G +KD +G A L+G +GYL                I +A +     K+    + GI
Sbjct: 61  GVAVGFAKDNNGVAGLAGAIGYL----------------IEVAVMKDINDKLNMGVLSGI 104

Query: 126 LVGVISAEIYNRYGQIELPKALSFFNGRRLVPILVSLLMIVVAFVLMYVWPVIYNALVSF 185
           + G+++  +YNRY  I+LP  L+FF G+R VPI+  ++ +V+     YVW  +   + + 
Sbjct: 105 VAGIVAGLLYNRYKDIKLPDYLAFFGGKRFVPIVTGVVCLVLGIAFGYVWQPVQAVIDTA 164

Query: 186 GEHIQQMGSAGAGIYAFFNRLLIPVGLHHALNSVFWF---------DVAGINDIPNFLSG 236
           G  +   G+ GA ++   NRLL+  GLHH LNS+ WF           A   D+  F +G
Sbjct: 165 GHWLTTAGALGAFVFGVLNRLLLVTGLHHILNSLTWFVFGTFTPPGGAAVTGDLHRFFAG 224

Query: 237 QQAIDAGKAIPGITGRYQAGFFPIMMFGLPGAALAIYHCARPENRSRVAGIMVAAALAAF 296
                         G +  GFFP+MMFGLP A LA++H A  E R+ V G++ + AL +F
Sbjct: 225 DPT----------AGTFMTGFFPVMMFGLPAACLAMFHEAPKERRAVVGGLLFSMALTSF 274

Query: 297 FTGITEPLEFSFMFVAPVLYVLHAVLTGISVFIAASMHWIAGFGFSAGLVDMVLSTRNPL 356
            TG+TEP+EFSFMF+APVLYV+HA+LTGIS+ I +++    GF FSAG +D VL+    L
Sbjct: 275 LTGVTEPIEFSFMFLAPVLYVIHALLTGISLAICSALGIHLGFTFSAGAIDYVLN--YGL 332

Query: 357 ATHWYMLLLQGAVFFVIYYGVFRFTITRFNLMTPGREAAVTQTVSESAPA------PAGN 410
           +T  +  +  G V+ V+YYG+FRF I +FN+ TPGRE A      +S  A       AG 
Sbjct: 333 STRGWWAIPIGLVYMVVYYGLFRFFIRKFNMATPGREPAAADEQVDSFAAGGFVSPVAGT 392

Query: 411 SQSMARGYLQAIGGKDNLTGIDACITRLRLSVKDSNLVDESAARNVGAVGVIRLNKQSVQ 470
           +   A+ Y+ A+GG  NL+ +DAC TRLRLSV DSN V E+  + +GA GV++    +VQ
Sbjct: 393 AVPRAQRYIAALGGASNLSVVDACTTRLRLSVVDSNKVSENELKTIGARGVLKRGSTNVQ 452

Query: 471 IVVGTQAENIAAALREV 487
           +++G +A+ IA  +R V
Sbjct: 453 VIIGPEADIIADEIRTV 469



 Score = 33.5 bits (75), Expect = 2e-05
 Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 15/100 (15%)

Query: 394 AAVTQTVSESAPAPAGNSQSMARG--------YLQAIGGKDNLTGIDA-CITRLRLSVKD 444
           AA  Q V   A AP   S +   G        +L   GG  N+  +DA   TRLR+ V+D
Sbjct: 483 AAPAQVV---AAAPVAASVAQGSGPLDPDPLRWLAVFGGAGNVLSLDAIAATRLRIVVRD 539

Query: 445 SNLVDESAARNVGAVGVIRLNKQSVQIVVGTQAENIAAAL 484
            + VD    + +  +    ++  +  IVVG  A+  A  L
Sbjct: 540 PSAVDR---QRLATLDTAWISADTFHIVVGDAAQRYAEKL 576