Pairwise Alignments

Query, 375 a.a., succinyl-diaminopimelate desuccinylase from Dickeya dianthicola ME23

Subject, 382 a.a., succinyl-diaminopimelate desuccinylase (RefSeq) from Shewanella amazonensis SB2B

 Score =  493 bits (1270), Expect = e-144
 Identities = 242/371 (65%), Positives = 291/371 (78%), Gaps = 1/371 (0%)

Query: 5   VIELAQQLIKRPSLSPDDAGCQALMIERLQAIGFTVEKLDVDDTQNFWAWRG-QGKTLAF 63
           VIEL ++LI RPS++P D GCQ LM +RL AIGFT+E +  +DT N WA RG +G    F
Sbjct: 10  VIELTRELISRPSVTPLDEGCQDLMAKRLAAIGFTIEPMVFEDTTNLWARRGTEGPVFCF 69

Query: 64  AGHTDVVPTGDNNQWQTPPFEPAIRDGMLYGRGAADMKGSLAAMVVAAERFVAAHPNHQG 123
           AGHTDVVP GD N+W TPPF+P + DG ++GRGAADMKGSLAAMVVAAERFVA HP+HQG
Sbjct: 70  AGHTDVVPVGDLNRWHTPPFDPVVIDGYIHGRGAADMKGSLAAMVVAAERFVAEHPDHQG 129

Query: 124 RLAFLITSDEEASAVNGTVKVVETLMARQERLEYCLVGEPSSTDRVGDVVKNGRRGSITA 183
            +AFLITSDEE   +NGTV+VVETL AR E++ + LVGEPSST  +GDVVKNGRRGS+T 
Sbjct: 130 SIAFLITSDEEGPFINGTVRVVETLEARHEKITWALVGEPSSTHLLGDVVKNGRRGSLTG 189

Query: 184 NLRIHGVQGHVAYPHLADNPVHRAIPALNELVATVWDQGNEFFPPTSMQIANINAGTGSN 243
           NL + G+QGHVAYPHLADNP+HRA PAL EL    WD+GNEFFPPTS QIANIN GTG++
Sbjct: 190 NLTVKGIQGHVAYPHLADNPIHRAAPALAELSRIEWDKGNEFFPPTSFQIANINGGTGAS 249

Query: 244 NVIPGELDVQFNFRFSTELTDELIKQQVEALLDRHQLNYTLEWRLSGHPFLTGRGELVDA 303
           NVIPGEL V FNFR+STE+T E +  +V  +LD H L+Y ++W  +G PFLTG G L+DA
Sbjct: 250 NVIPGELKVMFNFRYSTEVTAETLIARVLGILDAHGLDYDIDWVFNGLPFLTGEGPLLDA 309

Query: 304 VVNAVEHYSEITPQLLTTGGTSDGRFIARMGSQVVELGPVNATIHKVNECVSAADLQLLS 363
              A+   +       TTGGTSDGRFIA  G+QV+ELGPVNATIHKVNECV A+DL+LL+
Sbjct: 310 TREAIFEVTGTHTDPQTTGGTSDGRFIAPTGAQVIELGPVNATIHKVNECVKASDLELLT 369

Query: 364 RMYQRIMEQLI 374
             YQRI+E+L+
Sbjct: 370 GCYQRILEKLL 380