Pairwise Alignments

Query, 375 a.a., succinyl-diaminopimelate desuccinylase from Dickeya dianthicola ME23

Subject, 431 a.a., acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  117 bits (293), Expect = 6e-31
 Identities = 103/413 (24%), Positives = 174/413 (42%), Gaps = 49/413 (11%)

Query: 5   VIELAQQLIKRPSLSPDDAGCQ---ALMIERLQAIGFTVEKLDVD----DTQNFWAWR-- 55
           ++ L + LI+ P+L+P         A +  RL  +GF  E +       D++ +  W   
Sbjct: 18  LVALTRDLIRIPTLNPPGRHYHDICAFLEARLAPLGFRCELVRATGAPADSERYPRWNLV 77

Query: 56  ------GQGKTLAFAGHTDVVPTGDNNQWQTPPFEPAIRDGMLYGRGAADMKGSLAAMVV 109
                 G G  + F  H DVV  G    W   PF   +RDG +YGRGA DMKG LAA V+
Sbjct: 78  ARYEGGGPGDCVHFNSHHDVVEVGHG--WTMDPFGGEVRDGRVYGRGACDMKGGLAASVI 135

Query: 110 AAERFVAAHPNHQGRLAFLITSDEEASAVNGTVKVVETLMARQERLEYCLVGEPSSTDRV 169
           AAE F+A HP   G +    T+DEE+    G   + E      ER+++ ++ EP + DR 
Sbjct: 136 AAEAFIATHPEFSGAIEISATADEESGGFGGVAYLAEQGWFSPERVQHVIIPEPLNKDR- 194

Query: 170 GDVVKNGRRGSITANLRIHGVQGHVAYPHLADNPVHRAIPALNELVATVW---------- 219
              +  G RG   A +   G   H + P L D+ +      L+E+   ++          
Sbjct: 195 ---ICLGHRGVWWAEVETKGRIAHGSMPFLGDSAIRHMGAVLHEIETVLYPLLATKRTKM 251

Query: 220 DQGNEFFPPTSMQIANINAGTGSNNV---------IPGELDVQFNFRFSTELTDELIKQQ 270
               E    +++ I +++ G    +          +     +  + RF  E     +K +
Sbjct: 252 PVVPEGARQSTLNINSVHGGEPEQDADYTGLPAPCVADRCRIVLDRRFLIEEDITEVKAE 311

Query: 271 VEALLD-----RHQLNYTLEWRLSGHPFLTGR-GELVDAVVNAVEHYSEITPQLLTTGGT 324
           + ALL+     R    Y +       P +  R   +V +V  ++E      P  + + GT
Sbjct: 312 ITALLERVKATRPSFEYEIRELFEVQPTMADRDAPVVRSVAASIERVLARQPDYVVSPGT 371

Query: 325 SDGRFIARMG--SQVVELGP-VNATIHKVNECVSAADLQLLSRMYQRIMEQLI 374
            D + I R+G     +  GP +    H+ +E V   D+   +++    ++ L+
Sbjct: 372 YDQKHIDRIGRLKNCIAYGPGILDLAHQPDEWVGIDDMVDSAKVMALTLQDLL 424