Pairwise Alignments

Query, 375 a.a., succinyl-diaminopimelate desuccinylase from Dickeya dianthicola ME23

Subject, 379 a.a., succinyl-diaminopimelate desuccinylase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  237 bits (605), Expect = 3e-67
 Identities = 136/377 (36%), Positives = 204/377 (54%), Gaps = 9/377 (2%)

Query: 6   IELAQQLIKRPSLSPDDAGCQALMIERLQAIGFTVEKLDVDDTQNF---WAWRGQGKTLA 62
           + L   LI+ PS++P++ G  +L+  RL A GF   ++D +   N    W  +G  ++  
Sbjct: 5   VALTADLIRCPSVTPEEGGALSLLEARLSAAGFACTRVDRNGIANLFARWGEKGHARSFG 64

Query: 63  FAGHTDVVPTGDNNQWQTPPFEPAIRDGMLYGRGAADMKGSLAAMVVAAERFVAAHPNHQ 122
           F GHTDVVP G    W+  PF   +    +YGRGA DMK ++AA   AA  FVA  P   
Sbjct: 65  FNGHTDVVPVGARADWRFDPFGAQVEGDWMYGRGAVDMKSAVAAFAAAAMDFVADTPP-D 123

Query: 123 GRLAFLITSDEEASAVNGTVKVVETLMARQERLEYCLVGEPSSTDRVGDVVKNGRRGSIT 182
           G +   IT DEE  A +GTV +++ + A+ E ++ CLVGEP+  D +G+++K GRRGS+T
Sbjct: 124 GAVILAITGDEEGDAKDGTVALLDWMAAQGEAMDVCLVGEPTCPDEMGEMMKIGRRGSMT 183

Query: 183 ANLRIHGVQGHVAYPHLADNPVHRAIPALNELVATVWDQGNEFFPPTSMQIANINAGTGS 242
                 GVQGH AYPH A NP+      ++ L     D G + F P+++ +   + G  +
Sbjct: 184 FFFEALGVQGHSAYPHRAKNPLPALAKLVDRLAGLELDTGTDHFDPSTLAVTTFDTGNPA 243

Query: 243 NNVIP----GELDVQFNFRFSTELTDELIKQQVEALLDRHQLNYTLEWRLSGHPFLTGRG 298
           NNVIP      ++++FN   S+E    +++     +     +  T    +SG  F+T  G
Sbjct: 244 NNVIPAACRATVNIRFNDAHSSESLTAMVRGIAAEVAAETGIEITDRVSVSGESFITPPG 303

Query: 299 ELVDAVVNAVEHYSEITPQLLTTGGTSDGRFIARMGSQVVELGPVNATIHKVNECVSAAD 358
            L D V  AVE  +   P L T+GGTSD RF+ +    VVE G V  ++H+V+E V+ A 
Sbjct: 304 RLSDLVAAAVETETGRVPVLSTSGGTSDARFV-QHHCPVVEFGLVGKSMHQVDERVAIAQ 362

Query: 359 LQLLSRMYQRIMEQLIA 375
           +  L  +Y RI+    A
Sbjct: 363 IPQLKAIYTRILRDYFA 379