Pairwise Alignments

Query, 877 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Dickeya dianthicola ME23

Subject, 879 a.a., DNA gyrase, A subunit (RefSeq) from Shewanella loihica PV-4

 Score = 1278 bits (3307), Expect = 0.0
 Identities = 647/880 (73%), Positives = 750/880 (85%), Gaps = 5/880 (0%)

Query: 1   MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
           M+DLA  ITP+NIE+ELK+SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+ L NDWN
Sbjct: 1   MTDLASSITPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDWN 60

Query: 61  KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
           KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFS+RY LVDGQGNFGS+DGD+AAAM
Sbjct: 61  KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSMRYTLVDGQGNFGSVDGDAAAAM 120

Query: 121 RYTEVRMSKIAHELLSDLDKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT 180
           RYTE+RM K+AH+LL+DL+KETVD+VPNYDGTEQIP V+PTRIP LLVNGSSGIAVGMAT
Sbjct: 121 RYTEIRMDKLAHQLLADLEKETVDYVPNYDGTEQIPAVLPTRIPALLVNGSSGIAVGMAT 180

Query: 181 NIPPHNLSEVINGCLAYIDDENISVEGLMTHIPGPDFPTAAIINGKRGIEEAYRTGRGKV 240
           NIPPHNLSEVI+GCLA ID+ ++S+E LM HIPGPDFPTAAI+NG++GIE+AY+TGRGK 
Sbjct: 181 NIPPHNLSEVISGCLALIDEPSLSIEQLMEHIPGPDFPTAAIVNGRKGIEDAYKTGRGKA 240

Query: 241 YIRARAEVEADAKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG 300
            +RARA VE +  +GRE IIV EIPYQVNKARLIEKIAELVK+K+IEGIS LRDESDKDG
Sbjct: 241 VMRARATVETE-DNGRERIIVTEIPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKDG 299

Query: 301 MRIVIEIKRDAVGEVVLNHLYSQTQMQVSFGINMVALHQGQPKVMTLKEILAAFVRHRRE 360
           MRIVIE+KR  VGEV+LN+LY+QTQ+Q SFGINMVAL  GQPK+  LKE+L  F+ HRRE
Sbjct: 300 MRIVIEVKRGEVGEVILNNLYAQTQLQTSFGINMVALTNGQPKLFNLKEMLECFILHRRE 359

Query: 361 VVTRRTIFELRKARERAHILEGLAIALVNIDPIIELIRHASTPADAKAALVAQAWELGSV 420
           VVTRRT+FELRKARERAHILE LAIAL NIDPII LI+ + TPA+AK  LV+Q W LG+V
Sbjct: 360 VVTRRTVFELRKARERAHILEALAIALANIDPIIALIKASPTPAEAKTKLVSQGWALGNV 419

Query: 421 ASMLERAGDDAARPEWLEPEFGIHDDRYHLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE 480
             MLE+AGDDAARPEWL  EFGI D  Y+LTEQQAQAILDLRL KLTGLEHEK+L EY+E
Sbjct: 420 QGMLEKAGDDAARPEWLSAEFGIRDGLYYLTEQQAQAILDLRLHKLTGLEHEKILSEYEE 479

Query: 481 LLGQIAELLFILRRPERLMEVIREELLAIREQYNDVRRTEITHNSADINIEDLISEENVV 540
           LL  IA LL+ILR PERLMEVI+EEL  + E + D RRTE+  ++ DI++EDLI+EE+VV
Sbjct: 480 LLELIAALLYILRSPERLMEVIKEELQEVLEVFGDERRTELNASAVDISLEDLINEEDVV 539

Query: 541 VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY 600
           VTLSH GY KYQPLSDY+AQRRGGKGK+A ++K+EDF+++LLVANTHDTILCFS  G++Y
Sbjct: 540 VTLSHLGYAKYQPLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCFSDFGKMY 599

Query: 601 WLKVYQLPEASRGARGRPIINLLPLEPDERITAILPVREYEEGMNVFMATASGTVKKTAL 660
           WLKVYQLP ASR ARGRPIINLLPL   ERITAILPVREY+    V MAT+ GTVKKT+L
Sbjct: 600 WLKVYQLPLASRQARGRPIINLLPLAEGERITAILPVREYDADKYVIMATSHGTVKKTSL 659

Query: 661 TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSAEGKVVRFSESAVRTMGRTATG 720
            ++SRPR+ GIIAVNL +GD+LIGVD+T+G NEVMLFS EGKVVRFSE  VR MGRTATG
Sbjct: 660 DQYSRPRANGIIAVNLKDGDQLIGVDITNGDNEVMLFSNEGKVVRFSEDQVRGMGRTATG 719

Query: 721 VRGINLQNDDRVVSLIVPRGEGDILTVTQNGFGKRTAVTEYPVKSRATKGVISIKVSERN 780
           VRGI L++   VVSLIVP+ +G ILTVT+NG+GKRT + EYP KSRATKGV+SIKVSERN
Sbjct: 720 VRGIKLEDGQSVVSLIVPKNDGAILTVTENGYGKRTELDEYPAKSRATKGVVSIKVSERN 779

Query: 781 GKVVGAVQVDTADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDERVVGLQRVA 840
           G VVGAVQV   D+IM+I+D GTLVRT  S VS +GRNTQGVT+IRTA DE VVGLQR+ 
Sbjct: 780 GAVVGAVQVLENDEIMLISDKGTLVRTPASGVSTIGRNTQGVTIIRTATDETVVGLQRID 839

Query: 841 EPVEDDELDS----VVPVDGELPQEDIDEPETDDDTPADD 876
           E  ++ E D     ++    E  Q + + PE + D   ++
Sbjct: 840 EIQDEQEFDEEGNPIITDTVEEQQVEGEAPEAEPDVEPNE 879