Pairwise Alignments

Query, 877 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Dickeya dianthicola ME23

Subject, 873 a.a., DNA gyrase, A subunit from Dechlorosoma suillum PS

 Score = 1059 bits (2739), Expect = 0.0
 Identities = 530/872 (60%), Positives = 674/872 (77%), Gaps = 2/872 (0%)

Query: 1   MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
           M   A+E  P+++EEE++ SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM  LGNDWN
Sbjct: 1   MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELGNDWN 60

Query: 61  KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
           K YKKSAR+VGDVIGKYHPHGD+AVYDTIVRMAQ FSLRYMLVDGQGNFGS+DGD+AAAM
Sbjct: 61  KAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120

Query: 121 RYTEVRMSKIAHELLSDLDKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT 180
           RYTEVRM++I H+LL D+DKETVDF PNYDG+EQ P ++P RIPNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEVRMARIGHQLLEDIDKETVDFGPNYDGSEQEPLILPARIPNLLINGSSGIAVGMAT 180

Query: 181 NIPPHNLSEVINGCLAYIDDENISVEGLMTHIPGPDFPTAAIINGKRGIEEAYRTGRGKV 240
           NIPPHNL EV+  CLA + + N++++ L+  IP PDFPTA II G  G+ E YRTGRG+V
Sbjct: 181 NIPPHNLGEVVAACLALLQNPNLTIDELIDIIPAPDFPTAGIIYGVAGVREGYRTGRGRV 240

Query: 241 YIRARAEVEADAKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG 300
            +RA+  VE   K  R+ +I+ E+PYQVNK  L+EKI ELV EKRIEGIS LRDESDK G
Sbjct: 241 VMRAKTHVEDLDKGNRQALIIDELPYQVNKRTLLEKIGELVNEKRIEGISDLRDESDKSG 300

Query: 301 MRIVIEIKRDAVGEVVLNHLYSQTQMQVSFGINMVALHQGQPKVMTLKEILAAFVRHRRE 360
           MR+VIE+KR  + EVVLN+L+  TQ+Q +FG+NMVAL  GQP+++ LK++L  F+ HRRE
Sbjct: 301 MRVVIELKRGEMPEVVLNNLFKMTQLQDTFGMNMVALVDGQPRLLNLKQMLECFLAHRRE 360

Query: 361 VVTRRTIFELRKARERAHILEGLAIALVNIDPIIELIRHASTPADAKAALVAQAWELGSV 420
           V+ RRT+FELRKARE+AH  EGLA+AL N+D II LI+ A TPADA+  L+A+ W   +V
Sbjct: 361 VLNRRTVFELRKAREKAHTQEGLAVALDNVDEIIALIKAAPTPADARRELMARMWVSATV 420

Query: 421 ASMLERAGDDAARPEWLEPEFGIHDDRYHLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE 480
             ML RA  DA RPE + PE+G+    Y LTE QAQAIL+LRLQ+LTGLE +K++ +YKE
Sbjct: 421 TEMLARASLDATRPEGIAPEYGLSAQGYRLTEAQAQAILELRLQRLTGLERDKIVADYKE 480

Query: 481 LLGQIAELLFILRRPERLMEVIREELLAIREQYNDVRRTEITHNSADINIEDLISEENVV 540
           LL +IA+L+ IL RPER+ E+I EEL AIR+Q+ D RR+EI   + D+ IEDLI+ +++V
Sbjct: 481 LLEKIADLMDILARPERVTEIIGEELTAIRDQFGDDRRSEIVAYAQDLGIEDLITPQDMV 540

Query: 541 VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY 600
           VTLSH GY+K QPL+DY AQRRGG+GK AA +K++DF+D L VANTHD ILCFS+RGR Y
Sbjct: 541 VTLSHTGYIKSQPLADYRAQRRGGRGKQAAAMKDDDFVDHLFVANTHDYILCFSNRGRCY 600

Query: 601 WLKVYQLPEASRGARGRPIINLLPLEPDERITAILPVREYEEGMNVFMATASGTVKKTAL 660
           WLKVY++P+ SR +RG+PIIN+ P+E  E+I AILPV+E+ +   VFM T  GTVKKT+L
Sbjct: 601 WLKVYEVPQGSRISRGKPIINMFPMEEGEQINAILPVKEFSDDKYVFMCTVQGTVKKTSL 660

Query: 661 TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSAEGKVVRFSESAVRTMGRTATG 720
             FS PR AGIIAV+L+EGD LIG DLT G ++++L S  GK V F E  VR MGR + G
Sbjct: 661 ANFSNPRKAGIIAVDLDEGDYLIGADLTTGQSDIVLVSDGGKAVWFGEDQVRPMGRQSRG 720

Query: 721 VRGINLQNDDRVVSLIVPRGEGD-ILTVTQNGFGKRTAVTEYPVKSRATKGVISIKVSER 779
           VRG+ LQ    V+SL+V   E + +L  T+NG+GKRT + ++   SR T+GV++I  SER
Sbjct: 721 VRGMMLQEGQSVISLLVAESEEETVLVATENGYGKRTRLGDFRRSSRGTQGVMAIAASER 780

Query: 780 NGKVVGAVQVDTADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDERVVGLQRV 839
           NGK+V A  V  AD++M+IT  G L+RTRV+E+  +GR TQGVTLI     E++ GL++V
Sbjct: 781 NGKIVAAKLVTDADEVMLITTGGVLIRTRVAEIRELGRATQGVTLISLDAGEKLSGLEKV 840

Query: 840 AEPVEDDELDSVVPV-DGELPQEDIDEPETDD 870
           AE   D + ++   + DGE+ +   D   +++
Sbjct: 841 AESEGDTDAEAGDELADGEMLEGGEDSAASEE 872