Pairwise Alignments

Query, 877 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Dickeya dianthicola ME23

Subject, 918 a.a., DNA gyrase subunit A (RefSeq) from Shewanella sp. ANA-3

 Score = 1267 bits (3279), Expect = 0.0
 Identities = 656/915 (71%), Positives = 754/915 (82%), Gaps = 39/915 (4%)

Query: 1   MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
           M+DLA  I+P+NIE+ELK+SYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AMS L NDWN
Sbjct: 1   MTDLASSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN 60

Query: 61  KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
           KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRY LVDGQGNFGS+DGDSAAAM
Sbjct: 61  KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSAAAM 120

Query: 121 RYTEVRMSKIAHELLSDLDKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT 180
           RYTE+RM K+AH+LL+DL+KETVD+VPNYDGTEQIP V+PTR+PNLL+NGSSGIAVGMAT
Sbjct: 121 RYTEIRMDKLAHQLLADLEKETVDYVPNYDGTEQIPAVLPTRVPNLLINGSSGIAVGMAT 180

Query: 181 NIPPHNLSEVINGCLAYIDDENISVEGLMTHIPGPDFPTAAIINGKRGIEEAYRTGRGKV 240
           NIPPHNL+EV+ GCLA I D  +S+E LM HIPGPDFPTAAIING++GI +AY+TGRG+ 
Sbjct: 181 NIPPHNLTEVVKGCLALIADPALSIEQLMEHIPGPDFPTAAIINGRKGIIDAYKTGRGRA 240

Query: 241 YIRARAEVEADAKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG 300
            +RA AEVE +  +GRE IIV EIPYQVNKA+LIEKIAELVK+K+IEGIS LRDESDKDG
Sbjct: 241 VMRALAEVETE-DNGRERIIVTEIPYQVNKAKLIEKIAELVKDKKIEGISGLRDESDKDG 299

Query: 301 MRIVIEIKRDAVGEVVLNHLYSQTQMQVSFGINMVALHQGQPKVMTLKEILAAFVRHRRE 360
           MRIVIEIKR  VGEVVLN+LY+QTQMQ SFGINMVAL  GQPK+  LKE+L  F+ HRRE
Sbjct: 300 MRIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRRE 359

Query: 361 VVTRRTIFELRKARERAHILEGLAIALVNIDPIIELIRHASTPADAKAALVAQAWELGSV 420
           VVTRRT+FELRKARERAHILE LA+AL NIDPII LI+ + TPADAK  LV Q W LG V
Sbjct: 360 VVTRRTVFELRKARERAHILEALAVALANIDPIIALIKASPTPADAKVKLVEQGWALGHV 419

Query: 421 ASMLERAGDDAARPEWLEPEFGIHDDRYHLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE 480
             MLE+AGDDAARPEWLEPEFGI D  Y+LTEQQAQAIL+LRL +LTGLEH+K++ EY+E
Sbjct: 420 QGMLEKAGDDAARPEWLEPEFGIRDGLYYLTEQQAQAILELRLHRLTGLEHDKIIAEYEE 479

Query: 481 LLGQIAELLFILRRPERLMEVIREELLAIREQYNDVRRTEITHNSADINIEDLISEENVV 540
           LL  IA LLFILR PERLMEVI+EEL  I  +Y D RRT I  N  D+++EDLI+EE+VV
Sbjct: 480 LLEFIAGLLFILRSPERLMEVIKEELEEILAEYGDARRTVINANEIDMSLEDLINEEDVV 539

Query: 541 VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY 600
           VTLSH GY KYQPLSDY+AQRRGGKGK+A ++K+EDF+++LLVANTHDTILCFS  G++Y
Sbjct: 540 VTLSHLGYAKYQPLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCFSDFGKMY 599

Query: 601 WLKVYQLPEASRGARGRPIINLLPLEPDERITAILPVREYEEGMNVFMATASGTVKKTAL 660
           WLKVYQLP ASR +RGRPI+NLLPL   ERITAILPVREY E   + MAT++GTVKKTAL
Sbjct: 600 WLKVYQLPLASRTSRGRPIVNLLPLSDGERITAILPVREYAEDKYIIMATSNGTVKKTAL 659

Query: 661 TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSAEGKVVRFSE------------ 708
           T +S PR+ GIIAVNL +GD+LIGVD+T+G +E+MLFS EGKVVRF E            
Sbjct: 660 TAYSNPRANGIIAVNLKDGDQLIGVDITNGDDEIMLFSNEGKVVRFKEGEEVAVLDENGN 719

Query: 709 -------------SAVRTMGRTATGVRGINLQNDDRVVSLIVPRGEGDILTVTQNGFGKR 755
                          VR MGR ATGVRGI L+   RVVSLIVP+G+G ILTVT+NG+GKR
Sbjct: 720 AVLDEEGNPQINFKGVRPMGRGATGVRGIKLEEGQRVVSLIVPKGDGAILTVTENGYGKR 779

Query: 756 TAVTEYPVKSRATKGVISIKVSERNGKVVGAVQVDTADQIMMITDAGTLVRTRVSEVSIV 815
           T ++EYP KSRATKGV+SIKVSERNG VVGAVQV   D+IM+I+D GTLVRT  + VSI+
Sbjct: 780 TELSEYPSKSRATKGVVSIKVSERNGAVVGAVQVGGNDEIMLISDKGTLVRTPANGVSII 839

Query: 816 GRNTQGVTLIRTAEDERVVGLQRVAEPVEDD---ELDS----VVPV--DG----ELPQED 862
           GRNTQGVT+IRTA DE+VVGLQR+ E   D+   ELD     +VPV  +G    E P ED
Sbjct: 840 GRNTQGVTIIRTASDEKVVGLQRIDEIQGDEDEVELDENGMPIVPVVTEGDSVQEEPLED 899

Query: 863 IDEPETDDDTPADDE 877
             E E D+D   DDE
Sbjct: 900 ELEEELDEDEELDDE 914