Pairwise Alignments

Query, 615 a.a., protein translocase subunit SecD from Dickeya dianthicola ME23

Subject, 612 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

 Score =  481 bits (1237), Expect = e-140
 Identities = 257/606 (42%), Positives = 382/606 (63%), Gaps = 15/606 (2%)

Query: 1   MLNRYPLWKYLMLIVTIVVGLLYALPNLYGEDPAIQVTGARGTAASESTLVQIQNVLKEQ 60
           ++N Y  WKY++L+ TI++  L A+P  YGE P+IQ+     T+   + + ++  +L +Q
Sbjct: 13  LINHYSAWKYVVLVTTIIILTLSAIPTWYGEQPSIQLQSKDATSVLRN-VPELTQLLNKQ 71

Query: 61  NIASKSIALENGAILARFSTSDVQLRAREVLLNALGEKFVVALNLAPATPTWLRMLGAEP 120
           NI +  I  +       F+    Q +AR  L   + E   +  +     P WL  LG  P
Sbjct: 72  NIQADEITQQGDNTTLVFANETQQSQARNALDALVKEGDTITYSYVSVAPKWLGNLGFSP 131

Query: 121 MKLGLDLRGGVHFLMEVDMDTALGKLQEQTMDSLRSDLREKGIQYASVRKSDNYGVDILF 180
           +KLGLDLRGGV FL+ VD+D A  + ++  MD+++  LR + ++   V+   N   ++  
Sbjct: 132 IKLGLDLRGGVQFLLNVDVDKAFQEQRDSMMDAVKDSLRAERLRGVVVQAMGNDAFEVKT 191

Query: 181 RDGQLRDDAVNYLAPRHRDLVLNSSGSDTLRAVMSDARLGEAREYAVQQNINILRNRVNQ 240
              Q       YL   +R   +   GSD L+   S     E +   +QQN+ I+R+R+ +
Sbjct: 192 EQPQALSHVRKYLQENYRGWEIRQ-GSDQLQVQPSQQNKSEFQTATIQQNLKIMRDRIEE 250

Query: 241 LGVAEPLVQRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNSNVDPVALTNGRVPG 300
           LG+ E LVQRQG   I +ELPG+QD ++AK ++GATA+L F    S  D  +        
Sbjct: 251 LGITEALVQRQGEHAIRIELPGVQDPSQAKNVIGATASLAFYEAKSPTDARSY------- 303

Query: 301 DTEVMNMRDGGPVALYKRVILTGDHITDSTSGNDEYNRPQVNISLDSAGGNMMSNFTKDN 360
           D  ++   +G PV L KR +L+G+HI ++ +G D     +VNISLD AGG +MS+F+  +
Sbjct: 304 DDLILEDGNGRPVILAKRPVLSGEHIVNARAGVDNMGMSEVNISLDHAGGKIMSDFSGKH 363

Query: 361 IGKPMATLFVEYKDSGKKDANGRAVLEKQEEVINVATIQSRLGNSFRITGINNPNEARQL 420
           IGKPMAT++ EYK       N R    + E+VI+VATIQS+LG+ FRITG  +  EA+QL
Sbjct: 364 IGKPMATVYREYK------TNARGETVRSEKVISVATIQSQLGSQFRITGAGSMEEAQQL 417

Query: 421 SLLLRAGALIAPIQIVEERTIGPTLGMQNITQGLEACLAGLAVSILFMIFFYKKFGMIAT 480
           +LLLRAG+L AP+ IVEERTIG +LG +NI  G  A   G+A+++ FM  +Y++ G +A 
Sbjct: 418 ALLLRAGSLTAPVTIVEERTIGASLGEENIANGFAALALGMAMTLTFMALWYRRLGWVAN 477

Query: 481 SALLLNLVLVVGIMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQ 540
            ALL+N+  ++G+++LLPGA LT+PGIAG+VLT+ +AVD NVLI ERI+++LS GR   Q
Sbjct: 478 VALLVNMACLLGLIALLPGAVLTLPGIAGLVLTVGMAVDTNVLIFERIRDKLSEGRNFAQ 537

Query: 541 AIDEGYRGAFSSIFDANVTTLIKVLILYAIGTGSIKGFAITTGIGVATSMFTAIVGTRAI 600
           AID G+  AFS+I DAN+TT+I  +ILY+IG G I+GFA+T G+G+ TSMF+ +  +RA+
Sbjct: 538 AIDTGFDSAFSTILDANITTMITAVILYSIGNGPIQGFALTLGLGLLTSMFSGVFASRAL 597

Query: 601 VNLLYG 606
           +NL++G
Sbjct: 598 INLVWG 603