Pairwise Alignments

Query, 674 a.a., DNA topoisomerase III from Dickeya dianthicola ME23

Subject, 516 a.a., DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster from Pseudomonas fluorescens FW300-N2E2

 Score =  475 bits (1222), Expect = e-138
 Identities = 237/445 (53%), Positives = 308/445 (69%), Gaps = 1/445 (0%)

Query: 1   MRLFLCEKPSQGRDIAAVLGASKRGQGFLSGPDTVVTWAVGHLLENAMPELYGEQYGKPW 60
           MRLFLCEKPSQG+DIA VLGA +RG G   G    VTW +GHL+E A PE Y E++ K W
Sbjct: 24  MRLFLCEKPSQGKDIARVLGARQRGSGCFKGVGISVTWCIGHLVEAAPPETYDERF-KQW 82

Query: 61  RLDVLPLLPQKWQMVVKKDTADQFAVITRLLKQSDEVVIATDADREGEVIARELLEYCRF 120
            LD LP+LP  W++ VK +TA Q+ ++ +LL Q+ E+VIATDADREGE+IARE+LE C++
Sbjct: 83  SLDHLPILPISWRVRVKANTAAQYKIVKQLLAQTSELVIATDADREGEMIAREVLELCQY 142

Query: 121 NGVVSRLWLSALDEASVRKALANIRPGNETENLYYAGLGRGRADWLIGMNISRLYTLKAR 180
            G + RLWLSAL++AS+RKAL+ +R   ET++LY++ L R RADWLIGMN+SRL+TL  R
Sbjct: 143 RGSIQRLWLSALNDASIRKALSQLRQAEETQSLYHSALARSRADWLIGMNMSRLFTLLGR 202

Query: 181 ELGYDGVLSVGRVQTPALALVVNRDRLIASFVPKPYFQVNVKLESGGVVFPAEWVAAAAY 240
           + G +GVLSVGRVQTP L LVV+RDR I  FVP+PY+ + VKLE  G  F A+W A  + 
Sbjct: 203 QAGLNGVLSVGRVQTPTLRLVVDRDREIERFVPRPYWVIQVKLEVLGQAFTAQWAAPDSA 262

Query: 241 TDGERRCVNQAVAEQVRKLCLTVGKAVILDVEKKREKIPAPLAFSLGVLQQVCAERFGYS 300
           TD   RC+ QA+A Q ++     G A +L+VE +R +   PL F L  LQ+VC+ R GY 
Sbjct: 263 TDEAGRCIRQAIALQAQQSFKATGVAQVLEVETQRTREAPPLPFDLNTLQEVCSRRLGYG 322

Query: 301 PQQVLDTAQALYETHKATTYPRTDCGYLPESMLSEVPHVLSALQQSDPSLAPVIASIDPS 360
            Q+ LD AQ+LYETHKATTYPRTD GYLPESML E   V +AL +SDP + P++ S+D +
Sbjct: 323 VQETLDIAQSLYETHKATTYPRTDSGYLPESMLLEAEAVFAALIKSDPGVGPLVQSVDFT 382

Query: 361 FRSRIWDDKKITAHHAIIPTPHKCNLAGMNEAERNVYTLIRTHYLAQFMPLLEMDVTRAS 420
            RSR W+D +++AHH IIPT    +   ++E E  VY LIR  YLAQF+P  E D T   
Sbjct: 383 LRSRAWNDSQVSAHHGIIPTLEPFDRLALSERECAVYELIRARYLAQFLPPHEYDRTAVQ 442

Query: 421 FNIGGQLFRTSGRVTVVPGWKTLFG 445
              G  + +  G+  V  GW  + G
Sbjct: 443 LTCGNHVLKAHGKHVVESGWHRVLG 467