Pairwise Alignments

Query, 1021 a.a., efflux RND transporter permease subunit from Dickeya dianthicola ME23

Subject, 1049 a.a., efflux protein from Sinorhizobium meliloti 1021

 Score =  786 bits (2030), Expect = 0.0
 Identities = 445/1007 (44%), Positives = 620/1007 (61%), Gaps = 3/1007 (0%)

Query: 6    KQQWNLSAWALAHQQLVAFFMLVIVAAGVMSYERLPRNEDPAFTIKTAVVSASWPGATVQ 65
            K+ +NLS WA+ H  +  F + +I+  G +   R+ + EDP FT +  VV A WPGA++Q
Sbjct: 8    KKPFNLSRWAIGHPSIARFLLALIIITGGLGLLRMGQREDPEFTFRVMVVQAVWPGASIQ 67

Query: 66   DTVSFVTDVLEKKLQETPYLDFIESYSRPGEAVIFVNLRDSTPPSEVQGIWYAIRKKMKD 125
            +    V + +E+KLQETP+LDF+ SY+R G A+I V +   T   EV   +Y +RKK+ D
Sbjct: 68   EMEDQVVNKIERKLQETPHLDFVRSYTRAGSAIITVQIEGDTNADEVADAFYQVRKKVGD 127

Query: 126  IAPSLPDGVGEPAVNDEFDDTFGTIYGFTADGYSPRELRDRVDDIRTELLATPDVGKIDV 185
            IA  LP+GV  P  NDEF DTF T++  + DG+S  EL+    + R  LLATP V K+ V
Sbjct: 128  IANELPEGVLGPYFNDEFGDTFITLHSISGDGFSYPELKRFAIEGRDMLLATPGVEKVVV 187

Query: 186  LGVQDEQIVAAFSPRQLAGMGLDLQQVTAALQAQNAVSPTGAIRTDNDKVALRVSGAFVS 245
            LG Q E+I    S + LA  GL    +  A+  QN V   G++ T    V + V G    
Sbjct: 188  LGDQPEKIYIDLSSKVLAERGLTFNDLRNAIAGQNNVDYAGSVDTGTRSVRISVEGDVTK 247

Query: 246  EESLRQVTLHIGGRFIPLTDIATVYRQAAEPPAPAFRVNGQPAIGLAVSMAPTGNMLDFG 305
             E +R++ L  G R I L DIATV     +P A  FR NG  ++ + V MA   N+ D G
Sbjct: 248  VEDIRELRLRAGDRTIRLGDIATVTSGLEDPYARKFRFNGHDSVQIGVVMAKGFNVTDVG 307

Query: 306  QALRSKMATIGASLPHGIEVINVADQSSVVKSSVNGFVKVLLEAVVIVLAVSFVSLGSRA 365
            +A+ +      ++LP+G+ V  V++Q  VV  ++  F   L+EA++IVL VSF+S+G R+
Sbjct: 308  KAVEATYDRFESALPYGVSVDQVSNQPEVVTEAITEFSHALIEALIIVLIVSFLSIGWRS 367

Query: 366  GLVVAASIPMVLTMTFTGMEIAGIGLQRISLGALIIALGLLVDDAMITVEAMVSSLEKGE 425
            GLV+A +IP+VL  TF  M   GI LQRISLGALIIALGLLVDDAMI VE M   LE+G 
Sbjct: 368  GLVIAIAIPLVLAATFAIMYELGIDLQRISLGALIIALGLLVDDAMIVVEMMERKLEEGL 427

Query: 426  AREQAATRAYDTTAFPMLTGTLVMVAGFIPVGFAASSAGEYCYSLFIVVLISLLSSWAVA 485
             +  AA+ AY +TAFPMLTGTL+  AGFIPVGFA S+AGEY  SLF VV I+L+ SW VA
Sbjct: 428  EKIDAASFAYSSTAFPMLTGTLITTAGFIPVGFAESTAGEYVRSLFYVVGIALVVSWFVA 487

Query: 486  VLFSPLIGVWLLPKAMNAHDHHAGRLSRAYDRLLST---ALRYRGRTLLLSVALLALAVV 542
            V F+P +G  +L +  +A  HH    +R Y RL +T   A+R+R   LL+++A+   ++ 
Sbjct: 488  VYFTPWLGYMILKQRHHAGTHHDVFDTRFYRRLRTTVGWAVRHRVVVLLMTLAIFVTSLW 547

Query: 543  AAGRLEGEFFPASDRPELLVSLTLPRNASQQATEREVVRLEQSLKNDPDLDHFSTYVGSG 602
            A   +   FFP S RPE+LV L LP   S +  E++   LE+ + +D D    +TY+G G
Sbjct: 548  AFQFIPKNFFPQSSRPEILVDLWLPEGTSIKEVEKQAKALEERMMDDEDKRFIATYIGEG 607

Query: 603  AVRFYLPMDVLLQNENIAQLVVVAKGLKERDALRARLEKRLQQDFSHLVTRVSPLELGPP 662
            A RF+LP+D  L+N N AQL+V+AK    R+ L A+L   L +DF  +  +V  L LGPP
Sbjct: 608  APRFFLPLDQQLRNPNFAQLLVMAKDEPARERLIAKLRTILAEDFPSIRAKVDRLFLGPP 667

Query: 663  VGWPLKYRVTGPDIDKVREYAAGLATLIGGNPDAREVNLTAGEPERAIRIDLNQTEARAV 722
             GWP++ RV GPD ++VR  A  + T    NP    ++    EP  A+++ ++Q  ARA+
Sbjct: 668  TGWPVQMRVMGPDREEVRRIADQVKTKFQENPMLGAIHDDWLEPVPAMKLVIDQDRARAL 727

Query: 723  GISSQDVASALATIFSGSVVTSVRDRNRMVGVVVRARDEERQNLDTVASLQLRAANGQRV 782
            GI+SQ +   L    SG  + S RD    V ++ R     R  L  V S+ +    G  V
Sbjct: 728  GITSQRIRQMLQAAMSGVPLDSFRDGEETVSIMAREPGGNRHLLSAVQSVYVPTDFGGFV 787

Query: 783  PLGQIASVGYGVDEPIIWRRQRLPFITVQTDLAPGVRAQTLSTTLAPQVAAYQAALPAGY 842
            P+ QIA V   +++ I WRR RLP ITV+  L  GV+   ++  L  ++   +  L  GY
Sbjct: 788  PVSQIAKVVPVMEQGIEWRRDRLPTITVRGTLPDGVQPNDVAMQLFDELKGLRDGLAPGY 847

Query: 843  HIEEGGSAAESNKGNNSVYQVLPVTLLVMLILLMVQLQRFSRMMLALLMAPFGLIGVVAA 902
             +E  G A +S +   S+    P+ L+V++ILLMVQLQ F + ML L   P G+IG  AA
Sbjct: 848  KVEIQGGAEDSAESQASIAAKAPIMLVVIVILLMVQLQHFGKAMLVLATGPLGIIGAAAA 907

Query: 903  MLPTGTPMGFVALLGVIALAGMIIRNAVILISEVDTNTAAGMTTNEAIIHAARHRSRPIL 962
            +L +G P GFVA+LGVIAL G+IIRN++IL+ ++D + AAGM  +EAII AA  R RPI+
Sbjct: 908  LLISGAPFGFVAILGVIALLGIIIRNSIILVDQIDQDIAAGMERSEAIIGAAVRRFRPII 967

Query: 963  LTALAAILGMIPIATQVFWGPMAYAIIGGLIVATLLTLTVLPAAVSL 1009
            LTAL A+L +IPI+  VFWGP+AYA++GG++VAT+LT+ VLPA  +L
Sbjct: 968  LTALTAVLALIPISRGVFWGPLAYAMMGGILVATVLTILVLPAGYAL 1014