Pairwise Alignments

Query, 1021 a.a., efflux RND transporter permease subunit from Dickeya dianthicola ME23

Subject, 1014 a.a., integral membrane protein, AcrB/AcrD/AcrF family from Phaeobacter inhibens DSM 17395

 Score =  511 bits (1317), Expect = e-149
 Identities = 319/984 (32%), Positives = 519/984 (52%), Gaps = 11/984 (1%)

Query: 26   MLVIVAAGVMSYERLPRNEDPAFTIKTAVVSASWPGATVQDTVSFVTDVLEKKLQETPYL 85
            ML  +  G+  +  L R EDPAFTIK AVV   +PGA+ +     V++ LE  +Q+   +
Sbjct: 18   MLAALFGGIWGFLNLGRLEDPAFTIKQAVVITQYPGASAEQVALEVSEPLESAIQKMGEV 77

Query: 86   DFIESYSRPGEAVIFVNLRDSTPPSEVQGIWYAIRKKMKDIAPSLPDGVGEPAVNDEFDD 145
              I S ++PG + I V ++D+   SE+  +W  +R +++D A  LP+GV  P VND F D
Sbjct: 78   KQITSMNQPGLSRIDVEMQDTFDGSELPALWTKLRSEIEDAARDLPEGVSTPFVNDGFGD 137

Query: 146  TFGTIYGFTADGYSPRELRDRVDDIRTELLATPDVGKIDVLGVQDEQIVAAFSPRQLAGM 205
             FG  Y  TA+GY+  E  +    +R ELLA   V  +++ G+ +E I            
Sbjct: 138  VFGVFYAVTAEGYTDAERHELATFLRRELLAVDGVADVEIAGLPEEAIFVEPKMAITVNQ 197

Query: 206  GLDLQQVTAALQAQNAVSPTGAIRTDNDKVALRVSGAFVSEESLRQVTLHIG--GRFIPL 263
             + +  V+ AL   N+V   G +  DN  V  RVS    S+       L IG  G  I +
Sbjct: 198  NIPIDAVSNALATANSVRSAGQV--DNGPVQTRVSAPEGSDSVTEIAGLTIGSQGEVINI 255

Query: 264  TDIATVYRQAAEPPAPAFRVNGQPAIGLAVSMAPTGNMLDFGQALRSKMATIGASLPHGI 323
             D+A V+R   + P+   R +G  A  + ++   T N+++ GQ + +++A + + +P+G+
Sbjct: 256  IDMADVHRGRVDDPSQIIRFDGVEAFTIGIAGLATENIVEVGQRVDARLAELDSQIPYGV 315

Query: 324  EVINVADQSSVVKSSVNGFVKVLLEAVVIVLAVSFVSLGSRAGLVVAASIPMVLTMTFTG 383
            E+  +  Q  VV  + N F+  L  +V IV+ V  + +G RA +VV  ++ + +  T   
Sbjct: 316  ELKPIYQQHVVVDQASNDFLVNLAMSVGIVVIVLAIFMGWRAAIVVGTTLLLTVVGTLMF 375

Query: 384  MEIAGIGLQRISLGALIIALGLLVDDAMITVEAMVSSLEKGEAREQAATRAYDTTAFPML 443
            M    I ++RISLGALIIA+G+LVD+A++  E M  S+ +G +  +AA  A   T  P+L
Sbjct: 376  MNFFSIEMERISLGALIIAMGMLVDNAIVVAEGMQISMARGRSSREAAHEAAAKTQIPLL 435

Query: 444  TGTLVMVAGFIPVGFAASSAGEYCYSLFIVVLISLLSSWAVAVLFSPLIGVWLLPKAM-N 502
              T++ +  F  +G +  S GE+ +SLF V+ ISLL SW +A+  +PL+  +   +   +
Sbjct: 436  GATVIGIMAFAGIGLSPDSTGEFMFSLFAVIGISLLLSWLLALTATPLLAHYFFKQGSGD 495

Query: 503  AHDHHAGRLSRAYDRLLSTALRYRGRTLLLSVALLALAVVAAGRLEGEFFPASDRPELLV 562
             HD ++G L R Y ++L  +L+ R   +   +A+  L  +  G+++ +FFP S+ P   V
Sbjct: 496  DHDAYSGILFRTYSKILRLSLKLRWFVVPGLIAITVLCFIGFGQVKQQFFPNSNTPLFFV 555

Query: 563  SLTLPRNASQQATEREVVRLEQSLKNDPDLDHFSTYVGSGAVRFYLPMDVLLQNENIAQL 622
               LP+ +S   T   +   E+ L +  D++  +T+VG GA RF L  D      +   L
Sbjct: 556  HYKLPQGSSITTTSEHMRVFEEWLADRNDVETVTTFVGQGATRFMLTYDSEDPTPSYGHL 615

Query: 623  VVVAKGLKERDALRARLEKRLQQDFSHLVTRVSPLELGPPVGWPLKYRVTGPDIDKVREY 682
            ++ A  L+   AL+A LE   Q  F     R   L  GP  G P++ R  GPD   +R+ 
Sbjct: 616  IIRATSLEAIPALQADLEVFGQGRFPEGEFRTKRLVFGPGGGAPIEVRFAGPDPRVLRQL 675

Query: 683  A-AGLATLIGGNPDAREVNLTAGEPERAIRIDLNQTEARAVGISSQDVASALATIFSGSV 741
                +  L    PD   V     E E  ++       A+  G++ + +A AL     G  
Sbjct: 676  GEEAMLRLQQATPDILSVRQDWREQEITLKPIYATDRAQTAGVTREAIADALQFSTDGLR 735

Query: 742  VTSVRDRNRMVGVVVRARDEERQNLDTVASLQLRAANGQRVPLGQ-IASVGYGVDEPIIW 800
                R+R+R++ +V+R  +    NL  +  L    A G+ VPL Q +  +   V+  ++ 
Sbjct: 736  AGVFRERDRLIPIVLRRAEAGEYNL--MDQLVFSEAAGKFVPLEQMVGGIDVVVENTLVH 793

Query: 801  RRQRLPFITVQTDLAPGVRAQTLSTTLAPQVAAYQAALPAGYHIEEGGSAAESNKGNNSV 860
            RR R+P +TV  D++  + A ++ + +   +   Q  LPAGY +E GG    S   N S+
Sbjct: 794  RRDRVPTLTVGADISADLTAASVFSQVQDTIEEIQ--LPAGYTMEWGGEHENSADANASL 851

Query: 861  YQVLPVTLLVMLILLMVQLQRFSRMMLALLMAPFGLIGVVAAMLPTGTPMGFVALLGVIA 920
             + LPVT+L+M+++ ++      + ++  L+ P  + GVV  +L TG P  F ALLG+++
Sbjct: 852  GKQLPVTILIMVLISVLLFNAIRQPIIIWLLVPMSVNGVVIGLLGTGMPFTFTALLGLLS 911

Query: 921  LAGMIIRNAVILISEVDTNTAAGMTTNEAIIHAARHRSRPILLTALAAILGMIPIATQVF 980
            L+GM+I+N ++L+ E+D   A G    EAI+ A+  R RP++L A+  ILGM P+ T  F
Sbjct: 912  LSGMLIKNGIVLVEEIDLVRAEGRPLREAIVEASVSRLRPVMLAAVTTILGMAPLLTDAF 971

Query: 981  WGPMAYAIIGGLIVATLLTLTVLP 1004
            +  MA  I+GGL  AT+LTL   P
Sbjct: 972  FVSMAITIMGGLAFATVLTLVAAP 995