Pairwise Alignments

Query, 380 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

Subject, 334 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  125 bits (314), Expect = 2e-33
 Identities = 89/307 (28%), Positives = 147/307 (47%), Gaps = 4/307 (1%)

Query: 60  TVAPSVAGEVLSQTGEIRPTEETALGFRLDGRVVSRAVDVGAVVKQGEVIATLDARDSEN 119
           TV   +  +++   G ++P  + +L  +  GRVV   VDV   VK+ +V+  + A     
Sbjct: 28  TVKTELISQIVELDGVVQPVNQGSLAAQTSGRVVGLYVDVNDFVKKDQVLLEISAVQQSA 87

Query: 120 QLQSAKADLARAAASERLAEQNLKRMKQLAPNGAIARSQLDEAQSNWSSAVSVRESAQAS 179
            L +A+A LA A A  R A+  L R +QL P GAI++ Q+D A++   SA +  +SAQA+
Sbjct: 88  ALDAAQAQLASATAQNREAQAQLNRYRQLFPKGAISKDQMDSAEARARSADAAVKSAQAA 147

Query: 180 VNSEQDRLGYTRLSAPIAGVITAVSANPGQVVNAGQEVVRLATFAGRDAVFNVSERLIAS 239
           V   ++ LGYT ++AP  G++T      G+ V  G  ++R  +         + +R    
Sbjct: 148 VEQAKESLGYTNITAPYDGIVTQRMVELGETVAPGTPLLRGFSLDELRVETEIPQRYQPY 207

Query: 240 GLNDPLVTVSLLSNPAIKTQGHVRDVSPLADAQTRTWRVRISLVEPPPEMVLGATVQGEV 299
             +    TV       +K       +   AD Q+ T++ R+ L +    +V G  V+ E 
Sbjct: 208 VADVSQFTVRTAQGEQLKPVEF--SLFSYADPQSHTFKTRLELPQNSAALVPGMWVKTEF 265

Query: 300 TLPGGNVINLPASALTRQGGRPAVFVVDPQTQTLRLQPITLRHYSDSQMVVADGLAAGDK 359
                 V+ +P+SA+ R+    AV+ V+   +   L P+ L       + V  GL  GD 
Sbjct: 266 NYGQREVLVVPSSAVLRRAELSAVYRVNNGQRA--LNPVRLGQVYGDYVEVLSGLELGDV 323

Query: 360 VATAGVS 366
           VAT  V+
Sbjct: 324 VATQAVT 330