Pairwise Alignments

Query, 380 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

Subject, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  110 bits (276), Expect = 5e-29
 Identities = 94/355 (26%), Positives = 170/355 (47%), Gaps = 24/355 (6%)

Query: 28  LGTLLLAASLLSGCNDAGREAAAAPL-RPVRTVTVAPSVAGEVLSQTGEIRPTEETALGF 86
           L  ++ +A LL+GC +A + +A AP+ +P  T  VA   A + L+  G +R  +   L F
Sbjct: 16  LSAVIASALLLAGCGEAPQISAPAPVVKPALTEIVASQRASD-LTFNGVVRAAQRADLAF 74

Query: 87  RLDGRVVSRAVDVGAVVKQGEVIATLDARDSENQLQSAKADLARAAASERLAEQNLKRMK 146
           R+ GR+   AV  G  VK+G+++A+LD+RD++  L++A+ +L       +  EQ  +R K
Sbjct: 75  RISGRLTDIAVKEGDQVKKGQLLASLDSRDAKTALEAAQLEL-------KNTEQEYRRAK 127

Query: 147 QL-APNGAIARSQLDEAQSNWSSAVSVRESAQASVNSEQDRLGYTRLSAPIAGVITAVSA 205
            +     AI++++LD+  + +       + A+  V   + +L YT+++AP  GVI+  + 
Sbjct: 128 AIFEKTQAISKAELDKVTNRY-------DLAKNRVEEAKRKLEYTQITAPFDGVISEKTI 180

Query: 206 NPGQVVNAGQEVVRLATFAGRDAVFNVSERLIASGLNDPLVTVSLLSNPAIKTQGHVRDV 265
                V A Q ++ L      +    +  R++ SG+ +      L + P  +    +R  
Sbjct: 181 ENFAQVQANQVIMILQDLNDLEVAIEIPHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTY 240

Query: 266 SPLADAQTRTWRVRISLVE-----PPPEMVLGATVQGEVTLPGGNVINLPASALTRQG-G 319
           S    + ++T+ V +   +       P M        +       +I LP +AL     G
Sbjct: 241 STQPSSDSQTYSVVLGFEDLKGFRVMPGMSAKVIPVADKPADENTLITLPLTALVPDNQG 300

Query: 320 RPAVFVVDPQTQTLRLQPITLRHYSDSQMVVADGLAAGDKVATAGVSKLRAGEKV 374
           +  V+VV+ Q Q  +        Y D ++V+   L  G++V  AGVS +R G  V
Sbjct: 301 KQFVWVVNAQNQAEKRYVDIGTTYKD-RVVITQHLKPGEQVIIAGVSSVREGMTV 354