Pairwise Alignments

Query, 380 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

Subject, 386 a.a., Secretion protein HlyD from Pseudomonas syringae pv. syringae B728a

 Score =  114 bits (286), Expect = 4e-30
 Identities = 106/363 (29%), Positives = 158/363 (43%), Gaps = 25/363 (6%)

Query: 32  LLAASLLSGCNDAGREAAAAPLRP--VRTVTVAPSVAGEVLSQTGEIRPTEETALGFRLD 89
           LLAA  LSGC    ++  AA   P  V  +TV       V    G I P     +  R+ 
Sbjct: 15  LLAALGLSGCEQKQQQDHAASTAPKEVEAITVNTESFTVVDELPGRIEPVRVAQVRARVA 74

Query: 90  GRVVSRAVDVGAVVKQGEVIATLDARDSENQLQSAKADLARAAASERLAEQNLKRMKQLA 149
           G V+SR  + GA VK G V+  +D    +  L  A+ DLAR  A+    +  +KR + L 
Sbjct: 75  GIVLSRNFEEGADVKAGAVLFQIDPAPFKAALSKAQGDLARTQATLFETQATVKRYESLV 134

Query: 150 PNGAIARSQLDEAQSNWSSAVSVRESAQASVNSEQDRLGYTRLSAPIAGVITAVSANPGQ 209
              A++R   D A+S   +AV+ + SA+A V + +  LGY  + API+G I       G 
Sbjct: 135 EIEAVSRQTFDTARSALQNAVAAKRSAEADVETARLNLGYATVKAPISGRIGRAMVTEGA 194

Query: 210 VVNAGQEVVRLATFAGRDAVF---------------NVSERLIASGLNDPLVTVSLLSNP 254
           +V  G E   LAT    D V+                + E  +  G  D L ++S+    
Sbjct: 195 LVGQG-ETTLLATIQQLDPVYADFTQPAAEALQMRAAIQEGRLPKGGEDAL-SLSVDGTD 252

Query: 255 AIKTQGHVRDVSPLADAQTRTWRVRISLVEPPPEMVLGATVQGEVTLP---GGNVINLPA 311
              T G +       D  T    +R     P   ++ G  V+  V  P     N I +P 
Sbjct: 253 YTST-GTLLFTDVAVDRTTGQVSLRARFANPKGVLLPGMYVR--VRTPQRVDSNAILVPQ 309

Query: 312 SALTRQGGRPAVFVVDPQTQTLRLQPITLRHYSDSQMVVADGLAAGDKVATAGVSKLRAG 371
            A+ R G   A  +V  Q  T+  +P+      DS+  + +GL AG++V    ++ L AG
Sbjct: 310 RAVQRSGDGAARVLVIAQDGTVEARPVKTGAMQDSRWQITEGLKAGEQVIVGNMTGLSAG 369

Query: 372 EKV 374
           +KV
Sbjct: 370 DKV 372