Pairwise Alignments

Query, 380 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

Subject, 384 a.a., efflux protein from Sinorhizobium meliloti 1021

 Score =  181 bits (459), Expect = 3e-50
 Identities = 121/355 (34%), Positives = 191/355 (53%), Gaps = 7/355 (1%)

Query: 25  VGGLGTLLLAASLLSGCNDAGREAAAAPLRPVRTVTVAPSVAGEVLSQTGEIRPTEETAL 84
           V  L T +L  ++LSGC+    E     +RPV+ V +A +     L  +G +R   E  L
Sbjct: 12  VARLLTAILLGAVLSGCSQEKVETKET-IRPVKVVEIAAAGEPRELHYSGSVRARTEMNL 70

Query: 85  GFRLDGRVVSRAVDVGAVVKQGEVIATLDARDSENQLQSAKADLARAAASERLAEQNLKR 144
           GFR+ G++  R V++G  VK G+++A +DA D    + SA+A+L  A    +       R
Sbjct: 71  GFRVGGKITERLVNIGDRVKPGDILARIDATDYRLAVTSAEANLLAAEKQVQTTALAKLR 130

Query: 145 MKQLAPNGAIARSQLDEAQSNWSSAVSVRESAQASVNSEQDRLGYTRLSAPIAGVITAVS 204
            +QL      +++QLD+A   +  AVS R++A +S++  ++++ YT L A   G++TAV+
Sbjct: 131 AEQLFTKSFSSQAQLDQATLLYDQAVSTRDAAASSLSQAKNQVSYTDLKADQNGIVTAVN 190

Query: 205 ANPGQVVNAGQEVVRLATFAGRDAVFNVSERLIASGLNDPLVTVSLLSNPAIKTQGHVRD 264
           A+ GQVV  G  VV +A    ++    V E  +        V V   SN  +   GHVR+
Sbjct: 191 ADIGQVVGTGTPVVTVAVDGEKEVEIAVPEIDVTEFKPGKPVGVRFWSNDMLVLDGHVRE 250

Query: 265 VSPLADAQTRTWRVRISLVEPPPEMVL---GATVQGEVTLPGGNVINLPASALTRQGGRP 321
           VS  AD ++RT+ VR+SL  P  E VL    ATV+         ++++P SAL+++ G+ 
Sbjct: 251 VSGSADQRSRTFSVRVSL--PNDERVLLGMTATVEA-AAASSAPLVSIPLSALSKKDGQN 307

Query: 322 AVFVVDPQTQTLRLQPITLRHYSDSQMVVADGLAAGDKVATAGVSKLRAGEKVTL 376
            V++VD    T+  +PI L  ++D+ + V DGL AGD V  AG   +    KV L
Sbjct: 308 IVWIVDRDFSTVHARPIKLADFADNGVRVVDGLGAGDLVVAAGTQFMAEDLKVRL 362