Pairwise Alignments

Query, 389 a.a., HAMP domain-containing protein from Dickeya dianthicola ME23

Subject, 956 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  110 bits (276), Expect = 1e-28
 Identities = 74/238 (31%), Positives = 127/238 (53%), Gaps = 8/238 (3%)

Query: 158 AMTAQLERYERELHASHVA-MAHELRSPLTA---AMGRLQGMLDGVFSPDDRQLQMVMNQ 213
           A+   L R   ++    ++ ++HELR+PLTA   A+G L G + G  S + R L  + ++
Sbjct: 439 AVDVSLRRRMEQMKTEFISTVSHELRTPLTAIRGALGMLIGGIAGQVSDEARPLLGIAHK 498

Query: 214 -MQNLNRLIEDLHVLSMVSAGQLAIDKTRLNPVALLRDRIAWLKPHADAAGFTITLHGDE 272
             + L RLI D+  +  + AG+L  +  R +   L++  ++ + P+    G ++      
Sbjct: 499 NSERLVRLINDILDIEKLEAGRLTFNFGRHDVRPLVQQALSDITPYGQDYGVSLEFLDAP 558

Query: 273 E---GYCLADPLRLGQVFTILMDNALRYAAEGKAQHIEVARRQHRWLIRFRDYGPGVSAA 329
           E        DP R  QV   L+ NA++++  G    +++ RR     I  +D GPG+  A
Sbjct: 559 ELTSSEATLDPDRFAQVMANLLSNAIKHSPAGGCVTVDLRRRGKLLEIGVQDRGPGIPEA 618

Query: 330 FLPSIFERFSRADTSRARHSGGSGLGLSIAQAICEALGGSLTAENHPEGGMCFTLELP 387
           F   IFERF++AD+S AR  GG+GLGL+I +++ + + G +  +  P+ G  F L+LP
Sbjct: 619 FRSRIFERFAQADSSDARQRGGTGLGLAITRSLVQQMHGKIGFDCQPDQGTRFWLQLP 676