Pairwise Alignments

Query, 389 a.a., HAMP domain-containing protein from Dickeya dianthicola ME23

Subject, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

 Score =  112 bits (279), Expect = 4e-29
 Identities = 90/321 (28%), Positives = 160/321 (49%), Gaps = 36/321 (11%)

Query: 93  ILGVLVLVAIPLIVMLGLWAARPLSVQFSQLAMSARAVARGQFATRARMVPGAPAELTLL 152
           ++G+L+ + +  ++  G+   +PL     QL   A  V+ G++  +  ++  +  E   L
Sbjct: 323 LIGLLIALIVSYLINRGI--IKPLE----QLKQGAEWVSNGRYDQK--VIVDSDDEFGEL 374

Query: 153 TRDFNAMTAQ-------LERYERELHASH--------------VAMAHELRSPLTAAMGR 191
            + FN M  Q       L+++  EL  S+                ++HELR+PLT+  G 
Sbjct: 375 AKAFNKMATQINISDDKLKKHAEELKISYNELKELDKLKSELIAVVSHELRTPLTSIKGY 434

Query: 192 LQGMLDGVFSP-DDRQ---LQMVMNQMQNLNRLIEDLHVLSMVSAGQLAIDKTRLNPVAL 247
           ++ +LDG     +D Q   LQ+  + +  L RLIE +  LS +  G+L + + ++N  ++
Sbjct: 435 VELVLDGTMGAINDSQKKCLQVADDNIVRLRRLIESMLDLSKIERGELEMYREKVNLRSI 494

Query: 248 LRDRIAWLKPHADAAGFTITLHGDEEGYCL-ADPLRLGQVFTILMDNALRYAAEGKAQHI 306
           + D I +LKP A      I L+ + E   + AD  R+ QV T L++NA++++   ++  +
Sbjct: 495 VCDVIEYLKPLATEKN--IKLNKEVEDIAIEADKDRITQVLTNLIENAIKFSPANESILV 552

Query: 307 EVARRQHRWLIRFRDYGPGVSAAFLPSIFERFSRADTSRARHSGGSGLGLSIAQAICEAL 366
                     ++  D G G+    +  IF RF + D+S  R  GGSGLGL++ ++I EA 
Sbjct: 553 SGVLEDEHIHLKVTDRGAGIPKKDMEKIFNRFYQVDSSTKRKKGGSGLGLAVCKSIVEAH 612

Query: 367 GGSLTAENHPEGGMCFTLELP 387
            GS+  E+    G  F + LP
Sbjct: 613 KGSIWVESELGKGSTFHIILP 633