Pairwise Alignments

Query, 434 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

Subject, 439 a.a., ABC transporter for L-Fucose, periplasmic substrate-binding protein (from data) from Sinorhizobium meliloti 1021

 Score = 72.8 bits (177), Expect = 2e-17
 Identities = 111/446 (24%), Positives = 195/446 (43%), Gaps = 55/446 (12%)

Query: 32  LSRLL--LAAG---LACSM-ASQAADLVIAGRDDVYGKALDSTLARFQQQHP-------- 77
           ++RLL  ++AG   LAC+M A++AADL   G+ +  G  +D+ L   QQ           
Sbjct: 1   MNRLLSGVSAGVIMLACAMGAAKAADL--PGKFE--GVTIDAKLIGGQQYEKLYERIGEW 56

Query: 78  ----GKQIELL-KLPYANLYEKLVISLRENASAYDLMLMDDSWSPEFAG-NGWLQPLPES 131
               G ++ +L K  +  L +++   +      + +     S++P++      L  L  S
Sbjct: 57  EKATGAKVNILSKKNHFELDKEIKSDIATGGLTWCVGSNHSSFAPQYPDIYADLFGLIPS 116

Query: 132 LQSSDFIPAVLNVSRVPENGGPVYSLPVVG-NVAMFAYRQDLFDK------------HQL 178
            + + F+PAV++ S +    G +  LP    +V+   +++ L+              + L
Sbjct: 117 EEVAKFVPAVIDASTLE---GKLVMLPRAQFDVSALYFQKSLYQDEAKKTEFKAKYGYDL 173

Query: 179 NAPASWDAVLNDAKTLQQQEPGVSGVVFRGMKGNPIVSGFMPMLWAYGGNVIT-DGKASL 237
             P +W A ++D        P   G  F G K   I   F  ML A GG  +  DG+ + 
Sbjct: 174 APPDTW-AQVSDQAEFFAAPPNFYGTQFAG-KEEAINGRFYEMLVAEGGEYLDKDGRPAF 231

Query: 238 DSPQALQALNTLKAL---KAFAPTGVEVYNAADVRQAMEQGKAAMAIEVWPAWAATLDDA 294
           +S   ++AL     L   KA  P G   Y   D+ Q    G  A+ ++ WP WA+  +D 
Sbjct: 232 NSDAGVRALEWFVKLYKDKA-VPPGTTNYLWDDLGQGFASGSIAVNLD-WPGWASFFNDP 289

Query: 295 AKSNVVGKMTLQPAPGQNAGP-SPMLGIWQMAVAKNSRHNELAQQFLSYLTSAENQKALA 353
             S V G + ++  P  ++G  +   G    +V ++    E A   + +LT+ ++QK L 
Sbjct: 290 KSSKVAGNVGVKVQPAGSSGKRTGWSGHHGFSVTESCADKEAAASLVWWLTNEDSQK-LE 348

Query: 354 LELGLPPTRRSVYQDAQVVQKYRWYPAQL--AALEAGKAR---PRVRNWQEVESILGDYL 408
              G  PTR +V+       +   Y  ++  A  EA K     P+   W E+ + +   L
Sbjct: 349 SAAGPLPTRSAVWDFNIKAAEGDAYKTEVLQAFQEAAKHAFPVPQTAEWIEISNAVYPEL 408

Query: 409 QLALMDQMPAQVALQQANQKIAQVLK 434
           Q A++    ++ AL  A +K   +L+
Sbjct: 409 QAAILGDKTSKEALDAAAEKATGILE 434