Pairwise Alignments

Query, 275 a.a., carbohydrate ABC transporter permease from Dickeya dianthicola ME23

Subject, 281 a.a., ABC transporter for D-Glucosamine, permease component 1 (from data) from Sinorhizobium meliloti 1021

 Score =  140 bits (352), Expect = 4e-38
 Identities = 87/273 (31%), Positives = 148/273 (54%), Gaps = 12/273 (4%)

Query: 4   PYWLTALRALALTVALLFFTLPILWMAATAFKSTAEFASLSSPFWPQQWTLTHLKSLL-- 61
           P +   + A AL +A++    P+ W+   +    A+ ++    +WP    L+  ++LL  
Sbjct: 6   PLFSVFIHASALLLAVVILA-PVAWLLIMSISPAADLSAKPLAWWPSDIDLSRYRTLLSA 64

Query: 62  -DSGVGAR----LFNTLRVAAGATALSLLTGFLAAYTLARHRFPARLDSLFLLLVLLVKM 116
            ++  GA     L N+++VA  AT  +++    AA+ ++R   PA   SL+   V+   M
Sbjct: 65  VENSAGAAFIASLLNSIKVAGMATLAAVVVAVPAAWAVSRT--PAVAWSLYA--VIATYM 120

Query: 117 MPPMVVAIPLYSLLKSLHLLNSLTGLMLAYQVYTLPFCIWMLLSFIRDVPLSLEEAAAMD 176
           +PP+ +A+PLY  L    LLNS+ GL L Y     PF  W+L S    +P  +E AA +D
Sbjct: 121 LPPVALAVPLYMGLAYFGLLNSVFGLALVYLTILAPFTTWLLKSGFDSIPREIESAAMID 180

Query: 177 GAGLWRRLRYIVLPVCAPGLVATAIFTLIMAWNEFLFALLYLQTPQQFTLPLFIANFMTE 236
           GA L + LR + LP+ AP +  +A+F  ++AW+EF +ALL+    +  TL + IA+    
Sbjct: 181 GARLDQILRILTLPLAAPVMATSALFAFLLAWDEFFYALLFTSDQRAKTLTVAIADLAGG 240

Query: 237 NQIYWGELMSIGLLSSLPVLLVAGFVQRYLLRG 269
               +G + + G+L++LP +L+   +QR L+ G
Sbjct: 241 RVSDYGLIATAGVLAALPPVLIGLIMQRALISG 273