Pairwise Alignments

Query, 318 a.a., cytochrome c nitrite reductase subunit NrfD from Dickeya dianthicola ME23

Subject, 314 a.a., polysulfide reductase, subunit C (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  200 bits (508), Expect = 4e-56
 Identities = 113/315 (35%), Positives = 171/315 (54%), Gaps = 14/315 (4%)

Query: 3   DAFHFPSLVWDWPIAVYLLLVGISSGMMVLTLLFRRYLPAENQHTNPLITATAIVAPLSV 62
           D   +  + W W IAVYL + G+S+G +++ +  R +   + Q  + ++ A AI+ P+++
Sbjct: 7   DMAQYDPVTWHWVIAVYLFMAGLSAGSLLIGIGLRWFNQEQTQVESNILKAAAIIGPVAI 66

Query: 63  VVGLVILIFHLARPVTFWYLMIFYNPSSIMSLGVMLFQVYMLVMFLWLASLYQQPLLAWS 122
            +GL  L+F L +P  FW ++I YN  S+M++GV+    Y  + F +   + +  L  W 
Sbjct: 67  SLGLACLVFDLTKPFHFWLILINYNFQSVMAIGVLALLAYSPLAFAYAILVLRDDLPKWG 126

Query: 123 ERHLPGALHGLLNRVIALVSRGMRPVENGLLVLALLLGCYTGFLLSALKSFPLLNNPLLP 182
                    G L  +  L+    + +E  L VLA+ +G YTGFL+SA+ ++P+LN  +LP
Sbjct: 127 --------LGFLVPIAKLLMPFRKLIEVLLFVLAIGVGAYTGFLISAMNAYPMLNTAVLP 178

Query: 183 VLFLVSGVTSGI---AVLMMVGASARSHRDCPQTLHLLHALEKPVVLVELFLLFAFFVGL 239
            LFLVSG+++G    AVL +V     SH    +TL  +H LE PV+ +E+  LF  F  L
Sbjct: 179 ALFLVSGLSAGAAANAVLALVMFKTDSH---DKTLAKMHGLELPVMAIEIMFLFMLFCAL 235

Query: 240 LLGGGQKAVAAQVALSGFWGGVFWIGIIGIGMLAPLAAGSQPVMRRHVAYLPRIAAGLTL 299
              GG  A A     SG W  VFWIG++GIG   PL     P   RH      + A  +L
Sbjct: 236 YFKGGAAAAALASLTSGVWASVFWIGVVGIGFGVPLLFMLLPAATRHTKGAMIMVACASL 295

Query: 300 LGVFLLRLFVLYAGQ 314
            GV  LR F++YAGQ
Sbjct: 296 TGVLALRHFIVYAGQ 310