Pairwise Alignments

Query, 591 a.a., hypothetical protein from Dickeya dianthicola ME23

Subject, 605 a.a., terminase from Vibrio cholerae E7946 ATCC 55056

 Score =  630 bits (1624), Expect = 0.0
 Identities = 313/602 (51%), Positives = 411/602 (68%), Gaps = 19/602 (3%)

Query: 4   YSDELIGVARLLYLKRATPKEIAADLNLPNARIIYYWAQKFGWADLLSAESTEEAIERRY 63
           YS E+   AR LYLK  TP+EIA +LNL + RIIYYWA KFGW D+L  ++ +EAI  R 
Sbjct: 3   YSPEIRQAARALYLKAWTPREIADELNLNSDRIIYYWADKFGWRDMLREQTIDEAIANRI 62

Query: 64  QLLAGRDKKTELELQEMDMLIAHAVKLR------------------AQSNKHKEKLAAAG 105
           Q L   +  ++ +L  +D LI H VKL+                  AQS  H  K  +  
Sbjct: 63  QTLLEVENPSKPQLDMLDRLINHHVKLKKLRATEQPTQPNEAGTVSAQSGAHNSKSGSPK 122

Query: 106 HGNTPGSRSNDDDERPAKKRQYRKNDISSLTKEDFDAWADEHLFGYQKHLRLNIGQQVRN 165
             +   +  +     P+ KR+  KND+S +T+ DF  W D  LF YQ  +R N+ Q+ RN
Sbjct: 123 AESGTQTGDSGKQSAPSGKRKKVKNDVSEITEADFKLWHDS-LFAYQHTMRNNLHQRTRN 181

Query: 166 ILKSRQIGATWYFAFEAFENAVLTGEPQIFLSASRAQAEVFRSYIVNIAQQYFDITLTGN 225
           ILKSRQIGAT+YFA EA E A+LTG+ QIFLSASRAQA+VFR YIV IA+++  I +TGN
Sbjct: 182 ILKSRQIGATYYFAGEALEQAILTGDNQIFLSASRAQADVFRRYIVAIAKEFLGIEITGN 241

Query: 226 PIRLSNGAELRFLSTNKNTAQSYSGHLYCDEYFWVPNFARLNEVASAMATHDKWRTTYFS 285
           P  LSNGAEL +LSTN  TAQSY GH+Y DEYFW+  F  LN+VASAMATH KWR TYFS
Sbjct: 242 PSTLSNGAELHYLSTNGKTAQSYHGHVYIDEYFWIGKFDELNKVASAMATHKKWRKTYFS 301

Query: 286 TPSAKTHQAYPFWTGEEWKRGNKKRAGVNFPGFDELRDGGRLCPDGQWRYVITMEDAIRG 345
           TPS+K H AY FWTGE+W+     R  + FP FDELRDGGRLCPD QWRYV+T+EDA +G
Sbjct: 302 TPSSKMHPAYSFWTGEKWRGDKTTRKNIEFPTFDELRDGGRLCPDKQWRYVVTIEDAAKG 361

Query: 346 GFNLASLEKLRNRYNVDTFNMLYMCVFVDNKDAVFSFDDLERCGVDPATWQDHDPTASRP 405
           G +L  +E+LR  Y+   FN L+MCVFVD   ++F F+ +ERC VD   WQD+ P A+RP
Sbjct: 362 GCDLFDIEELREEYSETDFNNLFMCVFVDGASSIFEFNKIERCMVDSDIWQDYKPNAARP 421

Query: 406 FGNREVWGGYDPARSGDLSTFVIVAPPIYEGEKFRVLLVVNWHGMNFRYQANQIKKLFQR 465
           FG+REVW GYDP+R+ D +  ++VAPPI   EKFRVL    W G++F++QA++I K+F+R
Sbjct: 422 FGSREVWLGYDPSRTRDNAVLMVVAPPIVAVEKFRVLEKHTWRGLSFQHQASEISKVFER 481

Query: 466 YHFTYIGIDVTGIGAGVFENIQHFAMRQATAIRYGVETKNRLVMKAADVVESQRIEWDQD 525
           ++ TY+GID+TGIGAGV + + +   R+  AI Y  E KNRLVMK  D+++  R+++D  
Sbjct: 482 FNVTYLGIDITGIGAGVHDLLVNKHPRETVAIHYSNENKNRLVMKMIDIIDGNRLQFDAG 541

Query: 526 EKAIPASFMAIRRTTTASGNAMTFIADRSAETGHAEAFFAIAHALDNEPLNYENKPQSRW 585
            K    +FMAI+R  T SGN MTF A+RS + GHA+ F+A++HAL NEPL++  + +S W
Sbjct: 542 MKETAMAFMAIKRVATNSGNMMTFKAERSEQAGHADDFWALSHALINEPLDHSTQRKSTW 601

Query: 586 RL 587
           ++
Sbjct: 602 QM 603