Pairwise Alignments

Query, 684 a.a., replication endonuclease from Dickeya dianthicola ME23

Subject, 861 a.a., replication endonuclease from Vibrio cholerae E7946 ATCC 55056

 Score =  410 bits (1053), Expect = e-118
 Identities = 289/799 (36%), Positives = 393/799 (49%), Gaps = 158/799 (19%)

Query: 28  EPAGLSYVERSLWHLNPLDHQWRQQYLAGMPDYLAKYFGLRYEKLFKSDEHKGRRRANTF 87
           EP  +S +ER L+ ++ L H+WR+ +   +P YLAKYF  RY + +   E KG R AN+F
Sbjct: 41  EPDDMSVIERRLYEVDALSHEWRKAFFQDVPPYLAKYFAERYIRTY---EKKGARAANSF 97

Query: 88  L---LRTLGKSVLPRLRTVTERYQTQQHAA-------GDLPF-PFY-------------- 122
           L   +    + VL  L+   +   TQ+ A        G+ PF P +              
Sbjct: 98  LREKMHPAKERVLKVLQQYKQLPNTQKVALLSKEFEDGEDPFHPVFFTEYGNPEDIKSKQ 157

Query: 123 -------DDLEKLPVYDR-------DNIRALSQQLADFMAASLRDYTENRIRNTGKLTDR 168
                  D+ ++ PV  R       D +R ++ ++A  M A L+     +  +  +  D+
Sbjct: 158 VSFDFEKDEKDRKPVKQRLLAELEQDELRDMAFRIAKIMEAYLQLTASRKHADREEDVDQ 217

Query: 169 HITLLSFRHLGLLTLQAGTQPPYWAQFTKGRHPLSTEKAESGLLRMMSPEWWRARLKRRR 228
            +           T   G + P   ++ K  H      A S ++RM+S  WW  RL + R
Sbjct: 218 AVVDAYEALAHFCTQTFGIKAP--RKYQKQTHL----SASSDIMRMISDSWWLGRLVKVR 271

Query: 229 DIQREHMAIAVGQVQKAASPYVSRSTLDEWKEQKRRNREFFKAFELEDDEGNRV-SLDDK 287
            I REH+AIA+GQV   ASPY S   + E +EQ++RN E  K   L D+E      L D 
Sbjct: 272 KIMREHLAIAMGQVSNNASPYASWDCVREHQEQQQRNYEAIKNMVLFDEETEEEHDLWDM 331

Query: 288 VNASNANPAIRRCELMVRMRGFEDLAQEMGCAGEFYTITAPSRYHAVHSGGGFVEQWSGA 347
           V  S +NPAIRR ELMVR RG ED+  E+G  G F T+T PS+YH  +  GGF++ W+GA
Sbjct: 332 VKKSVSNPAIRRHELMVRCRGCEDIGNELGLQGLFLTLTTPSKYHNSYKKGGFIDHWNGA 391

Query: 348 SPRDTQKYLCGVWARIRAELSREEISVFGFRVVEPHHDGTPHWHLLLFMRPEHIEQVRDI 407
           SPRD Q YL   W  IRA+L+R+EI  FG RV EPHHDGTPHWHLL+++R E I  VRD 
Sbjct: 392 SPRDAQAYLNKKWQLIRAKLNRDEIRWFGVRVAEPHHDGTPHWHLLIWVRKEDISAVRDT 451

Query: 408 MAYHARREDANELNS--EKAQKARFH---------YEP------IDPEKGSATGYIAKYI 450
              +A  ED  EL+   EK ++  F          Y P      IDP KG+ATGYIAKYI
Sbjct: 452 FITYATEEDRGELHPEFEKEKQKPFRKGVYVGPLDYRPRCDFGYIDPTKGTATGYIAKYI 511

Query: 451 SKNIDGYALDGEADEETGENLRDMAKAVSAWASRWRIRQFQQIGGAPVTVYRELRRLGDK 510
           SKNIDGYA+DG+  +ETG+ ++DMA+ VSAW SRW IRQFQ  GGAPVT YRELRRL ++
Sbjct: 512 SKNIDGYAMDGDISDETGKPVKDMARNVSAWKSRWSIRQFQFFGGAPVTTYRELRRLANQ 571

Query: 511 Q------------------------------------LDNAAMDAVLA------------ 522
                                                + N  +  V+A            
Sbjct: 572 NKKAFMEYIFMQERADLISMYELLHYQLIGAFKPARVMTNQELVEVIAQSYEARAKTEIP 631

Query: 523 -------AADVGDWAAYTQAQGGPLVSRDALVVRLSYEVTERANQYAEDVQKVQGVYSPL 575
                  +AD G W  Y   QGGP V R  L+V   Y+    A+ YAE ++K++G+ +P 
Sbjct: 632 HVAAVLRSADEGRWHGYIMNQGGPFVKRKELLVTNVYQELPFASPYAEAIRKLEGIATP- 690

Query: 576 LGAPSAIITRTVQWKIVPKQATASAGAGVS--------GGSAAAWSSVNNCTPGLRRRLS 627
                 I TR   W I  K    + G  V         GGSAA+ SSVNNCT     ++S
Sbjct: 691 ---EQVIKTREKVWTIKRKGKETTEGEAVGFGSEATAFGGSAASRSSVNNCTDPFTGQVS 747

Query: 628 ELL-------RLRGFPPDPGL----VDVLMRGGHLAMSEGRAL-----------KMVSGR 665
             L       RL+G   D  +    +  L +G  L + +   L           K+   R
Sbjct: 748 TQLTRLLQPDRLKGSQNDQIVDEVAISALFKGSTLRLDDETELKIRPAEVDEHGKIRPAR 807

Query: 666 LEEVRQTGDCELWL---GW 681
           L EV++  D ++W    GW
Sbjct: 808 LVEVKREVDSDIWCRFEGW 826