Pairwise Alignments

Query, 295 a.a., carbohydrate ABC transporter permease from Dickeya dianthicola ME23

Subject, 282 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  124 bits (311), Expect = 2e-33
 Identities = 74/263 (28%), Positives = 127/263 (48%), Gaps = 9/263 (3%)

Query: 38  AALLWISPFIWMLSSAFSATTFGVGMASLLPRWPLTLSNFRD---AWQSADWISLYANTI 94
           A +LW+ P I +  + FS    G   A     WP   + F +    +  ++      N+ 
Sbjct: 24  ALILWLLPLIAV--AIFSVKPAGDFAAGNYWGWPAEFAGFENYARVFTDSEMPRYILNSF 81

Query: 95  FFTFGTFFVQLLTITTAGYVFACHEFRGKQTLFLLFLVQLMIMPVVMMVPNMMTLKAFGL 154
             T  T    +      G+    + FRG   +F +F+    +   ++MVP        GL
Sbjct: 82  MITIPTVIGAVALSCMTGFALGIYRFRGNLLIFFMFIAGNFVPFQILMVPVRDLTVDMGL 141

Query: 155 LNTLTGVMMPY--FTSAFGVFLMRQAFLAIPKEIEEAALMEGCRWWQVLFRVLLPMSWPS 212
            NT TG+++ +  F + F    MR    A+P E+ EAA +EG   W++ + V+LP+  P+
Sbjct: 142 YNTKTGLVLFHIAFQTGFCTLFMRNFIRALPYELIEAARVEGVAEWRIFWFVVLPLMKPA 201

Query: 213 ILAFATVSITYHWNEYLWPLMMLNDPDKQVLTVGLVSFAMGAESGGQWGMISAGTLMVCL 272
           I A + +  T+ WN+Y W +++   P+ Q +T G+ SF   A+ G  + M+SAG+L+  L
Sbjct: 202 IAALSVLIFTFIWNDYFWAVVLTQGPNAQPVTAGITSF--NAQFGIAYNMLSAGSLIAAL 259

Query: 273 PLMLAFIVFQKQFLRSFGFSGIK 295
           P ++ F + QK F+       +K
Sbjct: 260 PPVMMFFLMQKHFIAGLTLGAVK 282