Pairwise Alignments

Query, 576 a.a., single-stranded-DNA-specific exonuclease RecJ from Dickeya dianthicola ME23

Subject, 579 a.a., single-stranded-DNA-specific exonuclease RecJ from Vibrio cholerae E7946 ATCC 55056

 Score =  729 bits (1882), Expect = 0.0
 Identities = 364/574 (63%), Positives = 460/574 (80%), Gaps = 6/574 (1%)

Query: 6   QLRRRPTTETEL-PDSLPALLRRLYAQRGVRQMQELERSLRGLLDYRLLGGITQAVEVLR 64
           +++RRP  +  L PD +  LLRRLY  RGV  + +LE++ + L  ++ L GI +AVE+L 
Sbjct: 3   EIQRRPEPDLSLLPDHIDPLLRRLYLSRGVSNVAQLEKAAKALHSFKQLHGIDRAVELLF 62

Query: 65  QALADNRRIMVVGDFDADGATSTALTVLALRSMGGREIQYLVPNRFEDGYGLSPEVVAQA 124
            A+A+ +RI+VVGDFDADGATS+AL+VLALR +G R + YLVPNRFEDGYGLSPEVV QA
Sbjct: 63  AAIAEQKRIIVVGDFDADGATSSALSVLALRMLGSRNVDYLVPNRFEDGYGLSPEVVDQA 122

Query: 125 AAKGAELIVTVDNGISSHAGVDDAHRRGIAVVVTDHHLPGETLPAAEAMINPNLSDCAFP 184
             +GAE+I+TVDNG+SS  GV  A ++G+ VVVTDHHLPG+ LP  +AM+NPNL  CAFP
Sbjct: 123 IERGAEMIMTVDNGVSSLEGVRYAKQKGLQVVVTDHHLPGQELPEVDAMVNPNLQQCAFP 182

Query: 185 SKALAGVGVAFYLMMALRANLRESGWFAERGLAEPNLAELLDLVALGTVADVVPLDANNR 244
           SKALAGVGVAFYLMMAL  ++R+ GWFA +G+ EP L EL+DLVALGTVADVVPLD NNR
Sbjct: 183 SKALAGVGVAFYLMMALCVHMRQQGWFAAQGMVEPKLMELIDLVALGTVADVVPLDDNNR 242

Query: 245 ILISQGLSRIRAGKCRPGIRALLEVSNRDAVQLVASDLGFALGPRLNAAGRLDDMSVGVE 304
           IL+ QGL RIRAG  RPGI+AL+EV+ RDA +LVA+D GFALGPR+NAAGRLDDMS GVE
Sbjct: 243 ILVHQGLQRIRAGLARPGIQALIEVAKRDARRLVAADFGFALGPRINAAGRLDDMSFGVE 302

Query: 305 LLLCDDIVQARMLASDLDALNQSRREIEAGMQVEALHLCEQLERSRD-TLPLGLAMYHPE 363
           LLLC++I  AR +AS+LD LNQ+R+EIE GM+ EA+  CE+L+ S D  LP GL ++  +
Sbjct: 303 LLLCNNIHAARRMASELDGLNQTRKEIEEGMKQEAVAFCERLQLSDDRELPYGLVLFQRD 362

Query: 364 WHQGVVGILASRIKERFHRPVIAFAPAGDGILKGSGRSIAGLHLRDALERLDTCHPGLML 423
           WHQGV+GILASRIKE++HRPVIAFA  GDG LKGS RS+ GLH+RDAL+++DT +PG++L
Sbjct: 363 WHQGVIGILASRIKEKYHRPVIAFAEGGDGKLKGSCRSVPGLHMRDALDKIDTQNPGIIL 422

Query: 424 KFGGHAMAAGLSLVEDRFDEFRQRFAELVGEWLDASQLEGVVWSDGELAIPELTLGTAEM 483
           KFGGHAMAAGL++ E  F+ F + F +LV E LD + L+G++ SDGEL   E +L TAE+
Sbjct: 423 KFGGHAMAAGLTIEEQNFERFCRLFDQLVREELDEAALKGIILSDGELKPEEFSLHTAEL 482

Query: 484 LREAGPWGQAFPEPTFDGRFRLLQQRLVGERHLKVMVEPLGGG----PLLDGIAFNIDTL 539
           LR  GPWGQAFPEP FDG F++L Q+LVGE+HLK+M+EPL  G     ++DGIAFN+D  
Sbjct: 483 LRAGGPWGQAFPEPLFDGEFKVLHQKLVGEKHLKLMLEPLYKGFPTNVMIDGIAFNVDLR 542

Query: 540 LWPDSSVREVELAYKLDVNEFRGKRSVQLLIEHL 573
            WPD+SV+ V LAYKLD+NEFRG +S+QL+I+HL
Sbjct: 543 RWPDASVKTVRLAYKLDINEFRGNQSLQLMIDHL 576