Pairwise Alignments

Query, 299 a.a., site-specific tyrosine recombinase XerD from Dickeya dianthicola ME23

Subject, 322 a.a., Site-specific tyrosine recombinase from Xanthomonas campestris pv. campestris strain 8004

 Score =  187 bits (475), Expect = 3e-52
 Identities = 112/292 (38%), Positives = 164/292 (56%), Gaps = 8/292 (2%)

Query: 9   IEQFLDALWLERNLAENTLSSYRNDLRSLADWL-AHHECSLLQAQPSDLQDFLAERLEGG 67
           +E FL  L +ER ++ +TL +YR DL +L  W  A     + Q   + L+ F+      G
Sbjct: 31  VEPFLAHLQIERQVSAHTLDAYRRDLAALIGWASAQGSEDVAQLDSAQLRKFVTAEHRRG 90

Query: 68  YKATSSARLLSAMRRLFQYLYREKQRTDDPSAPLSSPKLPQRLPKDLTEAQVDALLAAPV 127
               S  R LSA R  + +L +  +    P+A L +PK P++LP+ L   +   L+  P 
Sbjct: 91  LSPKSLQRRLSACRSYYAWLLKHGRIATSPAAALRAPKAPRKLPQVLDADEAVRLVEVP- 149

Query: 128 TDQPIELRDKAMLELLYATGLRVSELVGLTISDVSLRQGVVRVIGKGNKERLVPLGEEAV 187
           TD P+ LRD+A+LEL Y++GLR+SEL  L   D+ L  G+V V+GKG K+RLVP+G  AV
Sbjct: 150 TDAPLGLRDRALLELFYSSGLRLSELCALRWRDLDLDSGLVTVLGKGGKQRLVPVGSHAV 209

Query: 188 YWLEQYLEYSRPWLLNGQTLDVLFPSNRAQQMTRQTFWHRIKHYATLASIDSNKLSPHVL 247
             L  +   S      G     +FP      ++++    RIK  A    +  + + PH+L
Sbjct: 210 AALRAWQRDS-----GGSAQTHVFPGRAGGAISQRAVQIRIKQLAVRQGMFKH-VHPHML 263

Query: 248 RHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRLLHQQHHPRA 299
           RH+FA+H+L    DLR VQ LLGHSD++TTQIYTH+  + L  ++   HPRA
Sbjct: 264 RHSFASHILESSGDLRGVQELLGHSDIATTQIYTHLDFQHLAKVYDAAHPRA 315