Pairwise Alignments

Query, 299 a.a., site-specific tyrosine recombinase XerD from Dickeya dianthicola ME23

Subject, 302 a.a., site-specific tyrosine recombinase XerD from Vibrio cholerae E7946 ATCC 55056

 Score =  415 bits (1067), Expect = e-121
 Identities = 206/295 (69%), Positives = 242/295 (82%)

Query: 5   DQALIEQFLDALWLERNLAENTLSSYRNDLRSLADWLAHHECSLLQAQPSDLQDFLAERL 64
           DQ L+EQFLD +W ER LAENT++SYRNDL  L +W+A ++  L     + LQ++ +   
Sbjct: 8   DQGLVEQFLDTMWFERGLAENTVASYRNDLSKLLEWMAQNQYRLDFISFAGLQEYQSWLS 67

Query: 65  EGGYKATSSARLLSAMRRLFQYLYREKQRTDDPSAPLSSPKLPQRLPKDLTEAQVDALLA 124
           E  YK TS AR+LSA+RRLFQYL+REK R DDPSA L SPKLP RLPKDL+EAQV+ALL+
Sbjct: 68  EQNYKPTSKARMLSAIRRLFQYLHREKVRADDPSALLVSPKLPTRLPKDLSEAQVEALLS 127

Query: 125 APVTDQPIELRDKAMLELLYATGLRVSELVGLTISDVSLRQGVVRVIGKGNKERLVPLGE 184
           AP    P+ELRDKAMLELLYATGLRV+ELV LT+ ++SLRQGVVRV+GKG KERLVP+GE
Sbjct: 128 APDPQSPLELRDKAMLELLYATGLRVTELVSLTMENMSLRQGVVRVMGKGGKERLVPMGE 187

Query: 185 EAVYWLEQYLEYSRPWLLNGQTLDVLFPSNRAQQMTRQTFWHRIKHYATLASIDSNKLSP 244
            A+ W+E +L+  R  LL  QT D++FPS+R QQMTRQTFWHRIKHYA +A ID  KLSP
Sbjct: 188 NAIEWIETFLQQGRSLLLGEQTSDIVFPSSRGQQMTRQTFWHRIKHYAVIAGIDVEKLSP 247

Query: 245 HVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRLLHQQHHPRA 299
           HVLRHAFATHLLN+GADLRVVQMLLGHSDLSTTQIYTHVATERL+ LH +HHPRA
Sbjct: 248 HVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHNEHHPRA 302